PlantCARE, a plant cis-acting regulatory element database

Nucleic Acids Res. 1999 Jan 1;27(1):295-6. doi: 10.1093/nar/27.1.295.

Abstract

PlantCARE is a database of plant cis- acting regulatory elements, enhancers and repressors. Besides the transcription motifs found on a sequence, it also offers a link to the EMBL entry that contains the full gene sequence as well as a description of the conditions in which a motif becomes functional. The information on these sites is given by matrices, consensus and individual site sequences on particular genes, depending on the available information. PlantCARE is a relational database available via the web at the URL: http://sphinx.rug.ac.be:8080/PlantCARE/

MeSH terms

  • Arabidopsis / genetics
  • Consensus Sequence / genetics
  • Databases, Factual* / trends
  • Enhancer Elements, Genetic / genetics
  • Gene Expression Regulation, Plant
  • Genes, Plant / genetics
  • Genome, Plant
  • Information Storage and Retrieval
  • Internet
  • Plants / genetics*
  • Promoter Regions, Genetic / genetics
  • Regulatory Sequences, Nucleic Acid / genetics*
  • Response Elements / genetics
  • Sequence Homology, Nucleic Acid
  • Software