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    SNRPD2P1 small nuclear ribonucleoprotein D2 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 119358, updated on 10-Oct-2023

    Summary

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    Official Symbol
    SNRPD2P1provided by HGNC
    Official Full Name
    small nuclear ribonucleoprotein D2 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:31459
    See related
    AllianceGenome:HGNC:31459
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    SNRPD2P; bA478K7.1
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    Genomic context

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    Location:
    10q23.31
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (89978662..89979168)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (90862173..90862679)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (91738419..91738925)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1374 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2598 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr10:91680718-91681917 Neighboring gene long intergenic non-protein coding RNA 1375 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3753 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3754 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:91840789-91841572 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:91846089-91846768 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2599 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:91918903-91919402 Neighboring gene uncharacterized LOC105378426 Neighboring gene RN7SK pseudogene 143

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Importin 8 is a gene silencing factor that targets argonaute proteins to distinct mRNAs. Weinmann L, et al. Cell, 2009 Feb 6. PMID 19167051
    2. Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization. Jin J, et al. Curr Biol, 2004 Aug 24. PMID 15324660
    3. Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme. Jeronimo C, et al. Mol Cell, 2007 Jul 20. PMID 17643375, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_023172.1 

      Range
      101..607
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      89978662..89979168
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      90862173..90862679
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Other Literature Sources
    Chemical Information
    Molecular Biology Databases
    Research Materials