LogOddsLogo

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LogOddsLogo - Examples

These examples were taken from the WebLogo Examples page. The Edit Logo buttons will transfer the relevant sequence data to the appropriate Logo creation form. There you can examine the sequence data and recreate the logo for yourself. Additional examples can be found at the Sequence Logo Gallery. Clicking on logo titles will take you to the corresponding WebLogo example, which contains additional information about the sequences used.

Catabolite Activator Protein (CAP)

Catabolite Activator Protein (CAP) Logo
CAP Binding Site Logo


E. coli Transcription Factor Binding Sites


LexA repressor is closely related to CAP, and has similar DNA protein interactions.
H-NS: Histone like, nucleoid-associated DNA-binding protein.
DNA biosynthesis initiation binding protein.
Arginine Repressor.


E. coli Promoters (Transcription Start Signals)


The -10 region of 350 E. coli promoters


Globins




HTH Proteins




Human Splice Sites



Exon-Intron (Donor) Sites
Intron-Exon (Acceptor) Sites