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Report for CCDS84966.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84966.1 Public Mus musculus 5 Adgrd1 23 108 98 CCDS HistoryNCBI Gene:243277Re-query CCDS DB by CCDS ID:84966.1Re-query CCDS DB by GeneID:243277See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84966.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000156437.2 ENSMUSP00000121217.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000156437.2Link to Ensembl Protein Viewer:ENSMUSP00000121217.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000156437Re-query CCDS DB by Protein ID:ENSMUSP00000121217
Original member Current member NCBI NM_001347486.1 NP_001334415.1 Accepted alive Link to Nucleotide Sequence:NM_001347486.1Link to Protein Sequence:NP_001334415.1Re-query CCDS DB by Nucleotide ID:NM_001347486Re-query CCDS DB by Protein ID:NP_001334415Link to BLAST:NP_001334415.1

Chromosomal Locations for CCDS 84966.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 129097161 129097226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129097309 129097345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129109578 129109661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129115055 129115177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129122411 129122590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129128854 129129108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129131577 129131632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129132712 129132867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129136935 129136994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129139588 129139705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129140734 129140844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129142460 129142535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129143967 129144108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129162595 129162668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129171806 129171929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129178049 129178152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129179169 129179280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129179543 129179696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129188326 129188392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129189633 129189699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129198618 129198709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129200680 129200806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129201132 129201173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129201456 129201548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129202464 129202559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2616 nt):
ATGAAGGATCTTCCAGCATTCCCTTGCAGCTGGGTCTGGCTACTCTGGTCCTTTTGCAGCGTCCAGGTGT
GTAGCACTCAGCCCAGAGCCCAGGAACATCCAGGCTTTGCGGTCTTGGCTTCTGCTTCTCATTACTGGCC
ATTGGAAAATGTGGATGGGATCCTTGAGCTTCAGGACACAACTGGAGATATCATGGAAGGGAAGGTGAAC
AAAGGCATTTACCTCAAGGAGGAGAAGGGCGTGACGTTTCTCTACTATGGCACCTACAAGTCATCCTGTA
TTAGCAACCCGGCCCAGTGTGGACCAGAGGGAGTGACATTTTCATTCTTCTGGAAGACTCAAGGAGACCA
GACCCGACCAGCCCCGTACGCATACGGGGGACAGGTCGTCTCTGACGGGTTCAAAGTCTGCTCTAGTGGT
GGAAAGGGCTCTGTGGAGCTGTACACACGTGATAATTCCATGACGTGGAAGGCCACCTTCAACCCTCCCG
GTCCTTACTGGACTCACGTCCTGTTCACGTGGAAATCCAAGGAGGGCCTGAAGGTCTACGTCAATGGGAC
TCTGAGCACCTCGGACCCCAGCGGGAAAGTGTCACACACCTACGGGGATCCCCACGTCAACCTGGTCATA
GGGTCAGAGCAGGACCAGACCAAGCGTTACGAAAACGGAGCTTTTGATGAATTCATCATCTGGGAACGGG
CACTGACTCCTGACGAGATCAAGATGTACTTTACCGCTGCCATTGGTAAACATGCTCTGTTGTCTTCAAC
ACCACCAGCGATGCCCACCGCACACACCGTGATACCCACAGATGCCTACCACCCTATCATCACCAACCTG
ACCGAGGAGAGAAAACGCTTCCAGAGACCGGGAACTGTGCTGAGATACCTTCAAAATGTGTCCCTCCGCT
TGCCCAATAAATCCCTCTCAGAGGAAACGGCGCTGAACCTCACAGAGACCTTCTTAAGAACGGTGGGTGA
GGTCCTCCTACTGCCCAGCTGGACCCATGAATCAGAGGACAACGCCATGACGCTGGGCCTGGTTGACACC
ATCGATACCGTCATGGGCCACATATCATCCAACCTACAGTCCAGAGAACCCCATGTCACCCTCACAGGCT
CGTCCTCCACGGCAGAATTCACTGTGGCCAAGGTCCTCCCACCAGCGCTCAGTGCTCCCCACTATAGATT
CCCAGCCCATGGGCATAGCTACATTGAAATTCCGAGAGAGGCCCTTCACAGCCAAGCCTGGACCACGATT
GTCGGCCTTCTCTACCACACCATGCACTATTATCTGAAAAACATCCACCCAACCAGCACAGAGATCCCCG
AGGCTGTGAACTGCAGAGACTGCCTGCTGTCTGTCGCCAGCCACCTGATCTCCCTGGAGGTGTCCCCACC
ACCCACTCTGTCCCAGAACCTATCCGGCTCTCCTCTGATCACTGTGCATCTCAGACACAAACTGACTCAA
AAGCAGTACAGCGATGCCACCAATGAGAGCAACCGTCTCTTCCTGTATTGCGCCTTCCTTAACTTCAGCT
CCGGGGAAGGCGTCTGGTCCAGCCAGGGCTGTGCACTCACAGAAGGAAATCTCACTTATTCAGTGTGCCA
CTGCACACACCTCACCAACTTCGCCATCCTCATGCAAGTGGTCCCACTGAAGCTCACACATGGACACCAG
GTGGCGCTGTCGTCCATCAGTTACGTTGGCTGCTCTCTGTCAGTTCTCTGCCTGGCTGCCACCCTGGTCA
CCTTCGCAGTACTGTCTTCTGTCAGCACCATTCGGAACCAGCGTTACCACATCCACGCCAACCTGTCCTT
CGCTGTCCTGGTAGCCCAGGTCTTGCTGCTGATCAGCTTCAGCATGGAGCCTGGCACGGTCCCGTGCCAG
GTGCTGGCTGTCCTCCTACATTACTTCTTCCTGACCGCCTTTGCTTGGATGCTGGTGGAGGGACTACATC
TCTACAGCATGGTGATAAAGGTCTTCGGCTCAGAGGACAGCAAGCACCTCTACTACTATGGGATAGGCTG
GGGGTGCCCTCTCCTCATCTGCATCATCTCCATATCATCCTCTATGGACAGCTATGGGACAAGTGACAGC
TGCTGGCTGGCTCTGGGGAGTGGCGCTATTTGGGCCTTTGTGGGCCCGGCTCTGTTGGTCATTGTGGTCA
ACATTGTTATCCTGGTTGCTGTGACGAGGGTCATCTCCCACATCAGCACTGATAGCTACAAGATACATGG
GGACCCCAGTGCCTTCAAGTTGACAGCCAAGGCTGTGGCTGTGCTGCTACCCATTCTGGGGACCTCATGG
GTATTTGGGGTGCTTGCCGTCAGTGACCGGGCCCTGGTCTTCCAATACATGTTTGCTATACTCAACTCTT
TACAGGGCCTCTTCATCTTTCTCTTTCACTGTCTCCTGAACTCAGAGGTAAGGGCTGCCTTCAAGCACAA
GACCAAGGTCTGGTCCCTCACGAGCAGCTCTGCCCGGACCGCGAACACGAAGCCTTTCAGTTCAGACACC
GTCAATGGGACCCGTCCAGGCACGGCATCTACAAAGCTAAGCCCTTGGGATAAGAGCAGCCATTCTGCCC
ACCGTGTCGACCTATCCGCTGTGTGA

Translation (871 aa):
MKDLPAFPCSWVWLLWSFCSVQVCSTQPRAQEHPGFAVLASASHYWPLENVDGILELQDTTGDIMEGKVN
KGIYLKEEKGVTFLYYGTYKSSCISNPAQCGPEGVTFSFFWKTQGDQTRPAPYAYGGQVVSDGFKVCSSG
GKGSVELYTRDNSMTWKATFNPPGPYWTHVLFTWKSKEGLKVYVNGTLSTSDPSGKVSHTYGDPHVNLVI
GSEQDQTKRYENGAFDEFIIWERALTPDEIKMYFTAAIGKHALLSSTPPAMPTAHTVIPTDAYHPIITNL
TEERKRFQRPGTVLRYLQNVSLRLPNKSLSEETALNLTETFLRTVGEVLLLPSWTHESEDNAMTLGLVDT
IDTVMGHISSNLQSREPHVTLTGSSSTAEFTVAKVLPPALSAPHYRFPAHGHSYIEIPREALHSQAWTTI
VGLLYHTMHYYLKNIHPTSTEIPEAVNCRDCLLSVASHLISLEVSPPPTLSQNLSGSPLITVHLRHKLTQ
KQYSDATNESNRLFLYCAFLNFSSGEGVWSSQGCALTEGNLTYSVCHCTHLTNFAILMQVVPLKLTHGHQ
VALSSISYVGCSLSVLCLAATLVTFAVLSSVSTIRNQRYHIHANLSFAVLVAQVLLLISFSMEPGTVPCQ
VLAVLLHYFFLTAFAWMLVEGLHLYSMVIKVFGSEDSKHLYYYGIGWGCPLLICIISISSSMDSYGTSDS
CWLALGSGAIWAFVGPALLVIVVNIVILVAVTRVISHISTDSYKIHGDPSAFKLTAKAVAVLLPILGTSW
VFGVLAVSDRALVFQYMFAILNSLQGLFIFLFHCLLNSEVRAAFKHKTKVWSLTSSSARTANTKPFSSDT
VNGTRPGTASTKLSPWDKSSHSAHRVDLSAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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