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Report for CCDS71759.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71759.1 Public Mus musculus 6 Fam131b 23 108 98 CCDS HistoryNCBI Gene:76156Re-query CCDS DB by CCDS ID:71759.1Re-query CCDS DB by GeneID:76156See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71759.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095974.3 ENSMUSP00000093670.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095974.3Link to Ensembl Protein Viewer:ENSMUSP00000093670.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000095974Re-query CCDS DB by Protein ID:ENSMUSP00000093670
Original member Current member NCBI NM_001286584.1 NP_001273513.1 Accepted alive Link to Nucleotide Sequence:NM_001286584.1Link to Protein Sequence:NP_001273513.1Re-query CCDS DB by Nucleotide ID:NM_001286584Re-query CCDS DB by Protein ID:NP_001273513Link to BLAST:NP_001273513.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273513.1 332 Q3TY60-1 332 100% 0 0

Chromosomal Locations for CCDS 71759.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 42318159 42318631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42318851 42318994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42320788 42320985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42321250 42321343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42321591 42321626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42321907 42321960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGGACAGCACCAGCTCGCTGCATGGCAGCAGTCTCCATCGGCCTTCGACAGAGCAAACACGAACAGATT
TCTCCTGGGACGGCATCAATCTTTCCATGGAGGACACCACTTCCATCCTTCCGAAGCTTAAGCGAAACTC
TAATGCCTATGGCATTGGGGCCCTGGCCAAGTCATCATTCTCAGGGATCTCGAGGAGCATGAAGGACCAT
GTGACAAAGCCTACCGCCATGGGCCAAGGCCGGGTGGCCCACATGATTGAGTGGCAGGGCTGGGGGAAGG
CTCCAACAATTCAGCCACAACATAGCCATGAGGCTGTGCGCAGGGATACAGACGCCTACTCTGACCTCAG
TGATGGCGAGAAGGAGGCACGTTTCCTAGCAGGTGTCATGGAACAGTTTGCTATTTCTGAGGCTACACTT
ATGGCTTGGTCTTCCATGGATGGTGAGGACATGAGTGTCAATTCTACCCAGGAGCCACTGGACTGCAACT
ACAGTGACAACTACCAGGAGCTGATGGAAAGTCAGGATGCACTAGCTCAAGCCCCAATGGATGGATGGCC
TCACTCCTACGTGTCACAGGGGATGTACTGTCTGGGGTCATCTGACGCCTGGGAAGCAAGTGATCAGTCC
CTCATTGCATCTCCAGCTACCGGATCCTATCTTGGCCCTGCATTTGATGACTCACAGCCGAGCCTGCATG
ACATGGGGCCTTCCCAACCTGCTTCAGGATACTCTGCTCAGGAGCCTCCACCTTTGTTGGGGGTAGACAC
TGACTGGGCATCAGAGGTTGGTGGGGTGGAACTGGCCAGGGGACCTGTAGAGGAAGAGAAGAGACCACTG
GCCCCTGAGGAGGAAGAAGATGCAGGATGCCGGGATCTGGAGTCACTTTCCCCACGAGAGGACCCAGAGA
TGTCCACTGCTCTCAGCCGGAAGGTGTCTGATGTCACATCCTCAGGTGTGCAGTCCTTTGATGAGGAGGA
AGGGGATGCCAACAACTAG

Translation (332 aa):
MDSTSSLHGSSLHRPSTEQTRTDFSWDGINLSMEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMKDH
VTKPTAMGQGRVAHMIEWQGWGKAPTIQPQHSHEAVRRDTDAYSDLSDGEKEARFLAGVMEQFAISEATL
MAWSSMDGEDMSVNSTQEPLDCNYSDNYQELMESQDALAQAPMDGWPHSYVSQGMYCLGSSDAWEASDQS
LIASPATGSYLGPAFDDSQPSLHDMGPSQPASGYSAQEPPPLLGVDTDWASEVGGVELARGPVEEEKRPL
APEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGDANN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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