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![](/corehtml/transparent.gif) |
Report for CCDS85152.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
85152.1 |
Public |
Mus musculus |
6 |
Mical3 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:194401](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:85152.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:194401](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 6 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Inferred exon combination |
Sequence IDs included in CCDS 85152.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000207889.1 |
ENSMUSP00000146544.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000207889.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000146544.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000207889](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000146544](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001270475.1 |
NP_001257404.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001270475.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001257404.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001270475](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001257404](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001257404.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001257404.1 |
1993 |
Q8CJ19-1 |
1993 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 85152.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5982 nt): ATGGAGGAGAGGAAGCAGGAGACAACGAACCAAGCTCACGTCCTCTTTGACCGCTTTGTCCAGGCCACCA CCTGCAAGGGGACCCTCAGGGCCTTCCAAGAGCTCTGTGACCACCTGGAGCTGAAGCCCAAGGACTACCG GTCCTTCTACCACAAGCTCAAGTCCAAGCTCAACTACTGGAAGGCCAAAGCCCTCTGGGCCAAATTGGAC AAGCGGGGCAGTCACAAAGACTACAAAAAGGGCAAAGCCTGCACCAACACAAAGTGTCTCATCATTGGAG CTGGCCCCTGTGGGCTGCGCACAGCCATCGACTTGTCCTTGTTGGGAGCCAAGGTGGTTGTTATTGAAAA GCGAGATGCCTTCTCCCGCAACAATGTCTTACATCTCTGGCCCTTCACCATACACGATCTCCGAGGCCTG GGTGCCAAGAAATTCTACGGCAAGTTCTGTGCCGGAGCCATCGACCATATCAGTATCCGTCAGCTCCAGC TAATCCTCTTGAAGGTAGCCTTGATCTTGGGCATTGAGATCCATGTCAATGTGGAATTCCAAGGACTTGT TCAGCCTCCCGAGGACCAAGAGAATGAACGGATAGGATGGCGAGCATTGGTGCACCCCAAAACTCATCCT GTATCAGAATATGAATTTGAAGTTATCATCGGTGGAGATGGGCGTAGGAACACCTTGGAAGGATTTCGTC GAAAAGAATTTCGTGGCAAGCTAGCCATTGCCATTACAGCAAATTTTATCAACCGCAACACAACCGCAGA GGCCAAAGTGGAGGAGATTAGTGGCGTGGCTTTTATATTCAACCAAAAATTTTTCCAGGAGCTGAGAGAA GCCACAGGTATTGACTTAGAGAACATCGTCTACTACAAAGATGACACACACTACTTTGTCATGACGGCCA AAAAGCAGAGTTTGCTGGACAAGGGGGTGATCCTGCATGACTACACAGACACGGAGCTGTTGCTTTCCCG GGAGAACGTGGACCAGGAGGCCCTGCTGAACTATGCCCGGGAGGCCGCAGACTTCTCTACCCAGCAGCAG CTGCCTTCTCTGGATTTCGCCATCAATCACTACGGGCAGCCAGACGTGGCCATGTTTGACTTTACCTGCA TGTACGCCTCTGAAAATGCCGCCTTGGTCCGGGAACAGAACGGACACCAGTTACTAGTAGCTTTGGTTGG AGACAGCCTCCTGGAGCCTTTCTGGCCAATGGGGACAGGAATAGCCCGGGGCTTTCTGGCTGCTATGGAC TCTGCCTGGATGGTACGAAGCTGGTCTCTGGGCACCAGCCCCTTGGAAGTCCTGGCAGAAAGGGAAAGCA TTTATAGGTTGCTGCCTCAGACCACCCCTGAGAACGTGAGCAAAAACTTCAGCCAATATAGCATCGACCC TGTCACTAGGTATCCCAATATCAACATCAACTTCCTCAGGCCAAGCCAGGTGCGCCATTTATACGATAGC GGAGAAACAAAAGATATCCACCTGGAAATGGAGAACATGGTGAATCCCCGAACCACTCCCAAGCTGACTC GCAACGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGGTGGTGCCAAAGGCAGACAGAAGGCTATTCAGG AGTCAATGTGACAGATCTCACTATGTCTTGGAAAAGTGGCCTGGCCCTGTGTGCGATCATCCACAGATAC CGCCCCGATCTAATAGACTTTGATTCTTTGGATGAGCAAAACGTGGAGAAGAATAATCAGCTGGCCTTTG ACATCGCTGAGAAGGAACTGGGTATCTCTCCCATCATGACGGGCAAGGAGATGGCTTCGGTCGGGGAGCC AGACAAGCTGTCCATGGTGATGTACCTCACGCAGTTCTACGAGATGTTCAAGGACTCGCTCTCCTCCAGC GACACCCTCGACCTGAATGCAGAGGAGAAAGCCGTCCTGATAGCCAGCACCAAATCCCCCATCTCCTTCC TGAGCAAACTCGGACAGACCATCTCTCGGAAGCGTTCGCCCAAGGATAAAAAAGAAAAGGACTCAGATGG GGCTGGAAAGAGGAGAAAAACCAGTCAGTCAGAGGAGGAGGAGCCTCCCCGGAGCTACAAAGGAGAAAGA CCGACCCTGGTGAGCACCCTGACGGACAGACGGATGGATGCTGCCGTTGGGAACCAGAACAAAGTGAAGT ACATGGCGACCCAGCTGCTGGCCAAGTTTGAAGAGAACGCACCTGCTCAGTCCACTGGTGTGAGGAGACA GGGCTCCATAAAGAAAGAGTTCCCGCAGAACTTGGGGGGCAGCGACACGTGCTATTTCTGCCAAAAGCGG GTCTACGTGATGGAGAGGCTGAGCGCCGAGGGCAAGTTCTTCCATCGAAGCTGCTTCAAGTGTGAGTACT GTGCCACCACGCTGCGCCTATCAGCCTACGCCTACGACATCGAGGATGGCAAATTCTACTGTAAGCCGCA CTACTGTTACCGACTATCTGGCTACGCGCAAAGGAAGAGGCCAGCGGTGGCTCCTCTGTCTGGAAAGGAA GTCAAAGGAGCCCTGCAGGATGGCCCCACTGCAGATGCAAATGGACTGGCCAGCGTTGCCGCCAGCTCAG CCGAGAGAAGTCCAGGTACCAGCATGAACGGCCTGGAGGAGCCCAGCATTGCCAAAAGGCTGAGGGGCAC CCCCGAGAGGATCGAGCTGGAGAACTACCGCCGATCTGTGAGGCAGGTGGAGGAGCTGGAGGAGGTACCC GAGGAGACACAGGCCGAGCATAACCTGAGCAGCGTCTTAGACAAAGGCACCGAAGAGGATGTGGCCAGCA GCAGTTCTGAGTCGGAGATGGAGGAGGAGGAAGAGGAAGATGACGAAGATGATCATCTCCCCACCTCTGA CCTGGGCGGGGTTCCCTGGAAGGAGGCAGTCAGGATCCATGCCCTTCTGAAGGGAAGGAGTGAAGAGGAG CTGGAAGCCTCCAAGAACTTCGAGCCCGAGGAAGAAGAAGAGGAGGAGGAATACGAAGAAGAGGATGAAG AGTATGAGGAGGAGGAAGAGGAGGAATCCAGTGAAGCCGGGAACAAGAGGCTGCAGCAGATCATAACCGC AGCGGATCCCTTGGCGATCCAGGCTGATGTGCACTGGACACACATCCGTGAGAGAGAGGCAGAGGAGAGG ATGCTCCCAACCTCTGAGTCCTCCACTTCTAGAGCTCCTCTAGATGAGGATGACCTAGAAGAGGACGCGG ACTCTGAGCCAGCAGAGACTGAAGGGGAAGCCGCGGAGGATGGGGACCCTGGAGACACCGGTGCTGAACT GGATGATCAGCACTGGTCTGACGACATCCCTTCTGATGCTGAAGCGGAGCATCGCTTACAGAGCCAGGCC AAGGTGAAAGCAGAGCTGGAGCTGAGAGTATCGGAAAACGAGGAAGAGAAGCCATCTGATGCGCCAAAGC AAGAGGAGAGAGGTACTTCCCAAGTCTCCAGCCCTAGCCAGCCACCTGAGAAACAAGTTGGTGTGTTCTC CCCAGCTCGCAGCCCTGGGACAGAGGAGGCCAAATCCCCACTTGCCACCAAGGTAAAGTCCCCCGAGGAG CCACTTTTCCCCACGCCTCTGCTCCTCAGAGAAAAGCCCAAAGCTGAAGTCCCTGAAGAACAGAAAGCTG TACTCTCGCCCATCCGGTCACAGCCTGTGGCCCTGCCAGAAGCCAGATCACCTACCTCACCCACCAGCTT ACAGCCAGAGTCTCTGTTGGCCCCTCCCACTCCTCCCACACCTCCCCCCACCCAACTCCCCATCTGTTCC CAACCTCAGCCCTCCTCGGATGCCTCCATCCCATCGCCCACCAAGTCCCCCATACGCTTCCAGCCAGTTC CAGCCAAAACATCCACACCCCTCACCCCACTCCCCGTGAAGAGCCAAGGAGACCCCAAAGACAGACTGAG TGGCCCCCTGGCTGTGGAGGAGGTCTTAAAGCGGAGTGATCTGGTGGAAGAATTCTGGATGAAGAGTGCT GAGATCCGCCGCAGCCTGGGCCTTACTCCCGTGGACCGGAGCAAGGGGTCAGAGCCCAGCCTCCCCTCCC CTGCCTCGAAGCCAATATCCCTAAAGTCCTACTCAGTTGACAAGTCACCTCAGGATGAGGGTCTCTGCCT TCTGAAACCTCCATCGGTTCCTAAAAGGTTGGGCCTACCAAAGTCAGCCGGTGACCAGCCCCCACTGCTG ACCCCAAAGTCGCCCTCCGACAAGGAGCTGAGGAGCAGCCAGGAGGAGCGAAGGGACCTGTCCAGCAGCT CAGGCCTGGGCCTCCATGATAGCTCCTCCAACATGAAGACCTTGGGCAGCCAGAGCTTCAACACCTCGGA CTCCACCATGCTCACCCCACCTTCCAGCCCACCCCCACCCCCACCCCCCAACGAGGAGCCTGCAACCCTT CGAAGGAAACCCCATCAGACTTTTGAGCGCAGGGAGGCCTCAATTATCCCCCCTCCCACCCCTGCCTCAT TCATGCGGCCCCCACGGGAGCCGGCCCAGCCCCCCAGGGAGGAGGTTCGGAAGTCCTTCGTGGAGAGTGT GGATGAGATCCCCTTTGCCGACGATGTGGAGGACACTTACGATGATAAGACGGAGGACTCCAGTCTGCAG GAGAAGTTCTTCACACCCCCTTCCTGCTGGTCCCGCTCGGAGAAGCTCCAGGCCAAGGAGAACGGGCGAC TCCCACCCCTGGAGCAGGACGTGCCACCACAGAAAAGGGGGCTGCCCCTGGTCTCCGCGGAAGCCAAGGA GCTGGCCGAGGAGCGCATGCGCGCCCGGGAGAAGTCTGTGAAGAGCCAGGCACTGCGAGATGCCATGGCC AAACAGCTGAGCCGGATGCAGGCCATGGAGATGGTGTCCTCCAGGTCCCACACGGCACAATCGCAGGGCA AGGAACTAGGATCCGAGTCCACCAGACACCCAAGCCTCCGAGGCACCCAGGAGCCCACCCTGAAGCATGA AGCCACCAGCGAAGAGATCCTCTCCCCTCCGTCAGACTCAGGAGGCCCCGATGGCTCCGTCACCTCATCT GAGGGCTCCAGTGGAAAGAGCAAAAAGAGGTCGTCGCTCTTCTCCCCCCGCAGGAATAAGAAAGAGAAGA AAACCAAAGGGGAAGCCCGGCCCCCCGAGAAACCCAGCCCAGGCCTCCCAGAAGATGTGGTAGCCAAGCC CAAGTCCCTGTGGAAATCTGTCTTCTCTGGGTACAAGAAGGACAAGAAGAAAAAGAGCGACGAGAAATCG TGTTCCAGCACGCCGTCCAGTGGCGCCACGGTGGACTCCGGCCAGCGCAGGGCGTCTCCAATGGTGAGAG CAGAGCTGCAGCTCCGCCGCCAGCTGAGTTTCTCAGAGGACTCAGACCTGTCCAGTGATGACATCCTTGA GAGGTCTTCCCAGAAGTCCAAGCGAGAGCCCAGAACCTACACAGAGGAGGAGCTGAGTGCCAAGCTGACG AGGCGTGTGCAGAAGGCGGCTCGGAGACAGGCTAAGCAGGAGGAACTGAAGCGGCTGCACCGAGCCCAGA TCATCCAGCGGCAACTGGAGCAAGTGGAAGAGAAACAGAGGCAGCTGGAGGAGAGGGGCGTTGCAGTAGA GAAGGCTCTTCGAGGAGAAGCAGGCATGGGCAAAAAGGATGACCCCAAGCTGATGCAGGAGTGGTTCAAG CTGGTGCAGGAGAAGAACGCAATGGTGCGCTACGAGTCGGAGCTGATGATTTTTGCCCGGGAGCTGGAGC TGGAAGACCGGCAGAGCCGACTACAGCAGGAGCTGAGGGAGCGGATGGCCGTGGAAGATCACCTGAAGAC CGAGGGGGAGCTTTCAGAGGAGAAGAAGATCCTGAACGAGATGCTGGAGGTGGTGGAGCAGAGAGACTCG CTGGTGGCCCTGCTGGAGGAGCAGCGACTGCGGGAGAAAGAGGAGGACAAGGACCTGGAGGCCGCCATGC TATGCAAAGGCTTCAGCCTGGACTGGTCCTGA
Translation (1993 aa): MEERKQETTNQAHVLFDRFVQATTCKGTLRAFQELCDHLELKPKDYRSFYHKLKSKLNYWKAKALWAKLD KRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDAFSRNNVLHLWPFTIHDLRGL GAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVNVEFQGLVQPPEDQENERIGWRALVHPKTHP VSEYEFEVIIGGDGRRNTLEGFRRKEFRGKLAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELRE ATGIDLENIVYYKDDTHYFVMTAKKQSLLDKGVILHDYTDTELLLSRENVDQEALLNYAREAADFSTQQQ LPSLDFAINHYGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNININFLRPSQVRHLYDS GETKDIHLEMENMVNPRTTPKLTRNESVARSSKLLGWCQRQTEGYSGVNVTDLTMSWKSGLALCAIIHRY RPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMFKDSLSSS DTLDLNAEEKAVLIASTKSPISFLSKLGQTISRKRSPKDKKEKDSDGAGKRRKTSQSEEEEPPRSYKGER PTLVSTLTDRRMDAAVGNQNKVKYMATQLLAKFEENAPAQSTGVRRQGSIKKEFPQNLGGSDTCYFCQKR VYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCYRLSGYAQRKRPAVAPLSGKE VKGALQDGPTADANGLASVAASSAERSPGTSMNGLEEPSIAKRLRGTPERIELENYRRSVRQVEELEEVP EETQAEHNLSSVLDKGTEEDVASSSSESEMEEEEEEDDEDDHLPTSDLGGVPWKEAVRIHALLKGRSEEE LEASKNFEPEEEEEEEEYEEEDEEYEEEEEEESSEAGNKRLQQIITAADPLAIQADVHWTHIREREAEER MLPTSESSTSRAPLDEDDLEEDADSEPAETEGEAAEDGDPGDTGAELDDQHWSDDIPSDAEAEHRLQSQA KVKAELELRVSENEEEKPSDAPKQEERGTSQVSSPSQPPEKQVGVFSPARSPGTEEAKSPLATKVKSPEE PLFPTPLLLREKPKAEVPEEQKAVLSPIRSQPVALPEARSPTSPTSLQPESLLAPPTPPTPPPTQLPICS QPQPSSDASIPSPTKSPIRFQPVPAKTSTPLTPLPVKSQGDPKDRLSGPLAVEEVLKRSDLVEEFWMKSA EIRRSLGLTPVDRSKGSEPSLPSPASKPISLKSYSVDKSPQDEGLCLLKPPSVPKRLGLPKSAGDQPPLL TPKSPSDKELRSSQEERRDLSSSSGLGLHDSSSNMKTLGSQSFNTSDSTMLTPPSSPPPPPPPNEEPATL RRKPHQTFERREASIIPPPTPASFMRPPREPAQPPREEVRKSFVESVDEIPFADDVEDTYDDKTEDSSLQ EKFFTPPSCWSRSEKLQAKENGRLPPLEQDVPPQKRGLPLVSAEAKELAEERMRAREKSVKSQALRDAMA KQLSRMQAMEMVSSRSHTAQSQGKELGSESTRHPSLRGTQEPTLKHEATSEEILSPPSDSGGPDGSVTSS EGSSGKSKKRSSLFSPRRNKKEKKTKGEARPPEKPSPGLPEDVVAKPKSLWKSVFSGYKKDKKKKSDEKS CSSTPSSGATVDSGQRRASPMVRAELQLRRQLSFSEDSDLSSDDILERSSQKSKREPRTYTEEELSAKLT RRVQKAARRQAKQEELKRLHRAQIIQRQLEQVEEKQRQLEERGVAVEKALRGEAGMGKKDDPKLMQEWFK LVQEKNAMVRYESELMIFARELELEDRQSRLQQELRERMAVEDHLKTEGELSEEKKILNEMLEVVEQRDS LVALLEEQRLREKEEDKDLEAAMLCKGFSLDWS
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