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Report for CCDS7375.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
7375.1 |
Public |
Homo sapiens |
10 |
WAPL |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:23063](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:7375.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:23063](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 10 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 7375.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000298767.10 |
ENSP00000298767.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000298767.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000298767.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000298767](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000298767](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_015045.5 |
NP_055860.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_015045.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_055860.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_015045](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_055860](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_055860.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_055860.1 |
1190 |
Q7Z5K2-1 |
1190 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 7375.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3573 nt): ATGACATCCAGATTTGGGAAAACATACAGTAGGAAAGGTGGAAATGGCAGTTCAAAATTCGATGAAGTCT TTTCCAACAAACGGACTACCCTTAGCACAAAATGGGGAGAGACCACATTTATGGCTAAATTAGGGCAGAA GAGGCCCAATTTCAAACCAGATATCCAAGAAATTCCGAAGAAACCTAAAGTGGAAGAAGAAAGTACTGGA GATCCTTTTGGATTTGATAGTGATGATGAGTCTCTACCAGTTTCTTCAAAGAATTTAGCCCAGGTTAAGT GTTCCTCTTATTCAGAATCTAGTGAAGCTGCTCAGTTGGAAGAGGTCACTTCAGTACTTGAAGCTAATAG CAAAATTAGTCATGTGGTCGTTGAAGACACTGTCGTTTCTGATAAATGCTTCCCTTTGGAGGACACTTTA CTTGGGAAAGAAAAGAGCACAAACCGAATTGTAGAAGATGATGCAAGCATAAGTAGCTGTAATAAATTAA TAACTTCAGATAAAGTGGAGAATTTTCATGAAGAACATGAAAAGAATAGTCACCATATTCACAAAAATGC TGATGACAGTACTAAGAAACCCAATGCAGAAACTACAGTGGCTTCTGAAATCAAGGAAACAAATGATACT TGGAACTCCCAGTTTGGGAAAAGGCCAGAATCACCATCAGAAATATCTCCAATCAAGGGATCTGTTAGAA CTGGTTTGTTTGAATGGGATAATGATTTTGAAGATATCAGATCAGAAGACTGTATTTTAAGTTTGGATAG TGATCCCCTTTTGGAGATGAAGGATGACGATTTTAAAAATCGATTGGAAAATCTGAATGAAGCCATTGAG GAAGATATTGTACAAAGTGTTCTTAGGCCAACCAACTGTAGGACGTACTGTAGGGCCAATAAAACGAAAT CCTCCCAAGGAGCATCAAATTTTGATAAGCTGATGGACGGCACCAGTCAGGCCTTAGCCAAAGCAAACAG TGAATCGAGTAAAGATGGCCTGAATCAGGCAAAGAAAGGGGGTGTAAGTTGTGGGACCAGTTTTAGAGGG ACAGTTGGACGGACTAGAGATTACACTGTTTTACATCCATCTTGCTTGTCAGTTTGTAATGTTACCATAC AGGATACTATGGAACGCAGCATGGATGAGTTCACTGCATCCACTCCTGCAGATTTGGGAGAAGCTGGTCG TCTCAGAAAAAAGGCAGATATTGCAACTTCTAAGACTACTACTAGATTTCGACCTAGTAATACTAAATCC AAAAAGGATGTTAAACTTGAATTTTTTGGTTTTGAAGATCATGAGACAGGAGGTGATGAAGGAGGTTCTG GAAGTTCTAATTACAAAATTAAGTATTTTGGCTTTGATGATCTCAGTGAAAGCGAAGATGATGAAGATGA TGACTGTCAAGTAGAAAGAAAGACAAGCAAAAAAAGAACTAAAACAGCTCCATCACCCTCCTTGCAGCCT CCCCCAGAAAGCAATGATAATTCCCAGGACAGTCAGTCTGGTACTAACAATGCAGAAAACTTGGATTTTA CAGAGGACTTGCCTGGTGTGCCTGAAAGTGTGAAGAAGCCCATAAATAAACAAGGAGATAAATCAAAGGA AAATACCAGAAAGATTTTTAGTGGCCCCAAACGGTCACCCACAAAAGCTGTATATAATGCCAGACATTGG AATCATCCAGATTCAGAAGAACTGCCTGGGCCACCAGTAGTAAAACCTCAGAGTGTCACAGTGAGGCTGT CTTCAAAGGAACCAAATCAAAAAGATGATGGAGTTTTTAAGGCTCCTGCACCACCATCCAAAGTGATAAA AACTGTGACAATACCTACTCAGCCCTACCAAGATATAGTTACTGCACTGAAATGCAGACGAGAAGACAAA GAATTATATACTGTTGTTCAGCACGTGAAGCACTTCAACGATGTTGTAGAATTTGGTGAAAATCAAGAGT TCACTGATGACATTGAGTACTTGTTAAGTGGCTTAAAGAGCACTCAGCCTCTAAACACACGTTGCCTTAG TGTTATTAGCTTGGCTACTAAATGTGCCATGCCCAGTTTTCGAATGCACCTGAGAGCACATGGGATGGTA GCAATGGTCTTTAAAACCTTGGATGATTCCCAGCACCATCAGAATCTGTCCCTCTGTACAGCTGCCCTCA TGTATATACTGAGTAGAGATCGTTTGAACATGGATCTTGATAGAGCTAGCTTAGATCTAATGATTCGACT TTTGGAACTGGAACAAGATGCTTCATCAGCCAAGCTACTGAATGAAAAAGACATGAACAAAATTAAAGAA AAAATCCGAAGGCTCTGTGAAACTGTACACAACAAGCATCTTGATCTAGAAAATATAACGACTGGGCATT TAGCTATGGAGACATTATTATCCCTTACTTCTAAACGAGCAGGAGACTGGTTTAAAGAAGAACTCCGGCT TTTGGGTGGTCTGGATCATATTGTAGATAAAGTAAAAGAATGTGTGGATCATTTAAGTAGAGATGAGGAT GAAGAGAAACTGGTAGCCTCACTATGGGGAGCAGAGAGATGTTTACGAGTTTTAGAAAGTGTAACTGTGC ATAATCCCGAAAATCAAAGCTACTTGATAGCATATAAAGATTCCCAACTTATTGTTTCATCAGCTAAAGC ATTACAGCATTGTGAAGAACTGATTCAGCAGTACAACCGTGCTGAGGACAGCATATGCTTAGCTGACAGT AAGCCTCTGCCTCACCAGAATGTAACTAACCATGTAGGCAAAGCAGTGGAGGACTGCATGAGGGCCATCA TCGGGGTGTTGCTTAATTTAACTAATGATAATGAGTGGGGCAGCACCAAAACAGGAGAGCAGGACGGTCT CATAGGCACAGCGCTGAACTGTGTGCTTCAGGTTCCAAAGTACCTACCTCAGGAGCAGAGATTTGATATT CGAGTGCTGGGCTTAGGTCTGCTGATAAATCTAGTGGAGTATAGTGCTCGGAATCGGCACTGTCTTGTCA ACATGGAAACATCGTGCTCTTTTGATTCTTCCATCTGTAGTGGAGAAGGGGATGATAGTTTAAGGATAGG TGGACAAGTTCATGCTGTCCAGGCTTTAGTGCAGCTATTCCTTGAGCGAGAGCGGGCAGCCCAGCTAGCA GAAAGTAAAACAGATGAGTTGATCAAAGATGCTCCCACCACTCAGCATGATAAGAGTGGAGAGTGGCAAG AAACAAGTGGAGAAATACAGTGGGTGTCAACTGAAAAGACTGATGGTACAGAAGAGAAACATAAGAAGGA GGAGGAGGATGAAGAACTTGACCTCAATAAAGCCCTTCAGCATGCCGGCAAACACATGGAGGATTGCATT GTGGCCTCCTACACAGCACTACTTCTTGGGTGTCTCTGCCAGGAAAGTCCAATCAATGTAACCACTGTGC GGGAATATCTGCCAGAAGGAGACTTTTCAATAATGACAGAGATGCTCAAAAAATTTTTGAGTTTTATGAA TCTCACTTGTGCTGTTGGAACAACTGGCCAGAAATCTATCTCTAGAGTGATTGAATATTTGGAACATTGC TAG
Translation (1190 aa): MTSRFGKTYSRKGGNGSSKFDEVFSNKRTTLSTKWGETTFMAKLGQKRPNFKPDIQEIPKKPKVEEESTG DPFGFDSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKISHVVVEDTVVSDKCFPLEDTL LGKEKSTNRIVEDDASISSCNKLITSDKVENFHEEHEKNSHHIHKNADDSTKKPNAETTVASEIKETNDT WNSQFGKRPESPSEISPIKGSVRTGLFEWDNDFEDIRSEDCILSLDSDPLLEMKDDDFKNRLENLNEAIE EDIVQSVLRPTNCRTYCRANKTKSSQGASNFDKLMDGTSQALAKANSESSKDGLNQAKKGGVSCGTSFRG TVGRTRDYTVLHPSCLSVCNVTIQDTMERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKS KKDVKLEFFGFEDHETGGDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVERKTSKKRTKTAPSPSLQP PPESNDNSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQGDKSKENTRKIFSGPKRSPTKAVYNARHW NHPDSEELPGPPVVKPQSVTVRLSSKEPNQKDDGVFKAPAPPSKVIKTVTIPTQPYQDIVTALKCRREDK ELYTVVQHVKHFNDVVEFGENQEFTDDIEYLLSGLKSTQPLNTRCLSVISLATKCAMPSFRMHLRAHGMV AMVFKTLDDSQHHQNLSLCTAALMYILSRDRLNMDLDRASLDLMIRLLELEQDASSAKLLNEKDMNKIKE KIRRLCETVHNKHLDLENITTGHLAMETLLSLTSKRAGDWFKEELRLLGGLDHIVDKVKECVDHLSRDED EEKLVASLWGAERCLRVLESVTVHNPENQSYLIAYKDSQLIVSSAKALQHCEELIQQYNRAEDSICLADS KPLPHQNVTNHVGKAVEDCMRAIIGVLLNLTNDNEWGSTKTGEQDGLIGTALNCVLQVPKYLPQEQRFDI RVLGLGLLINLVEYSARNRHCLVNMETSCSFDSSICSGEGDDSLRIGGQVHAVQALVQLFLERERAAQLA ESKTDELIKDAPTTQHDKSGEWQETSGEIQWVSTEKTDGTEEKHKKEEEDEELDLNKALQHAGKHMEDCI VASYTALLLGCLCQESPINVTTVREYLPEGDFSIMTEMLKKFLSFMNLTCAVGTTGQKSISRVIEYLEHC
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