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Report for CCDS37849.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
37849.1 |
Public |
Mus musculus |
18 |
Spire1 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:68166](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:37849.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 18 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 37849.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000224799.1 |
ENSMUSP00000153492.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000224799.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000153492.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000224799](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000153492](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_176832.2 |
NP_789802.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_176832.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_789802.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_176832](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_789802](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_789802.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 37849.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1548 nt): ATGGAACTGCATACATTTCTGACCAAAATTAAGAGTGCAAAGGAGAACCTTAAGAAGATTCAAGAAATGG AAAAGGGTGATGAATCTAGCACAGATCTGGAGGACCTGAAAAATGCAGACTGGGCCCGGTTCTGGGTACA AGTGATGAGGGATTTGCGAAATGGGGTAAAACTTAAGAAAGTCCAGCAGCGGCAGTACAACCCTCTGCCC ATTGAGTACCAACTGACCCCTTATGAGATGCTCATGGACGACATTCGGTGCAAAAGATACACCTTGAGAA AAGTAATGGTAAATGGTGACGTCCCCCCTCGGTTGAAAAAGAGTGCTCATGAGGTCATCCTTGACTTTAT CAGATCAAGACCCCCTTTAAATCCAGTTTCAGCCAGAAAACTGAAACCAACCCCACCACGGCCACGGAGC CTCCATGAAAGAATATTAGAAGAAATTAAAGCAGAAAGAAAGCTTCGACCTGTGTCACCAGAAGAAATTA GACGGAGCAGACTAGATGTCACTACGCCAGAATCTCCAAAGAATGTTGGAGAATCATCTATGGTGAATGG AGGCTTAACATCTCAAACAAAAGAAAATGGGCTGAGCGCTGCCCAGCAGGGGTCTGCGCAGAGGAAGAGG CTCCTCAAAGCCCCAACCCTGGCTGAACTGGACAGCTCTGACTCTGAGGAGGAAAAAAGTCTGCACAAGT CAACCAGCAGCAGCAGTGCGTCTCCCTCCCTCTATGAGGATCCAGTACTGGAGGCCATGTGCTCCAGGAA GAAGCCTCCAAAATTCTTGCCCATCTCATCAACACCCCAGCCAGAGAGAAGGCAGCCACCGCAGAGGCGC CACTCCATTGAGAAGGAAACACCTACGAACGTGAGGCAGTTTCTGCCACCATCCAGGCAGAGCTCACGGT CTCTTGAGGAATTCTGCTACCCAGTGGAGTGCCTCGCTCTCACTGTGGAGGAAGTGATGCACATCCGTCA GGTCCTGGTGAAAGCAGAGCTGGAAAAGTACCAACAGTATAAGGATGTCTACACTGCCCTGAAAAAAGGA AAGCTCTGCTTCTGTTGCCGAACCCGGAGGTTTTCCTTCTTCACCTGGTCTTACACCTGTCAGTTCTGTA AGAGGCCCGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGCCTTCCAAGCCATACTCTACTCTACCTAT CTTCTCTTTGGGACCTTCTGCCTTGCAAAGGGGGGAAAGCTGTTCGAGGTCAGAAAAACCCTCCACTAGT CACCATCGGCCTCTTCGAAGTATTGCCAGGTTCTCCACAAAATCCAGGTCTGTGGACAAGTCCGATGAGG AGCTCCAGTTTCCCAAAGAGCTCATGGAGGACTGGAGCACGATGGAGGTGTGTGTGGACTGCAAAAAGTT CATCTCCGAGATCATCAGCTCAAGCCGGCGCAGCCTGGTGCTGGCTAACAAAAGAGCCAGGTTGAAAAGG AAGACACAGTCTTTCTACATGTCCTCGGCGGGCCCCTCGGAGTACTGCCCTTCAGAACGGACTATCAACG AGATCTGA
Translation (515 aa): MELHTFLTKIKSAKENLKKIQEMEKGDESSTDLEDLKNADWARFWVQVMRDLRNGVKLKKVQQRQYNPLP IEYQLTPYEMLMDDIRCKRYTLRKVMVNGDVPPRLKKSAHEVILDFIRSRPPLNPVSARKLKPTPPRPRS LHERILEEIKAERKLRPVSPEEIRRSRLDVTTPESPKNVGESSMVNGGLTSQTKENGLSAAQQGSAQRKR LLKAPTLAELDSSDSEEEKSLHKSTSSSSASPSLYEDPVLEAMCSRKKPPKFLPISSTPQPERRQPPQRR HSIEKETPTNVRQFLPPSRQSSRSLEEFCYPVECLALTVEEVMHIRQVLVKAELEKYQQYKDVYTALKKG KLCFCCRTRRFSFFTWSYTCQFCKRPVCSQCCKKMRLPSKPYSTLPIFSLGPSALQRGESCSRSEKPSTS HHRPLRSIARFSTKSRSVDKSDEELQFPKELMEDWSTMEVCVDCKKFISEIISSSRRSLVLANKRARLKR KTQSFYMSSAGPSEYCPSERTINEI
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