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Report for CCDS51790.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
51790.1 |
Public |
Mus musculus |
6 |
Kbtbd2 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:210973](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:51790.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:210973](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 6 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 51790.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000114321.1 |
ENSMUSP00000109960.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000114321.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000109960.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000114321](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000109960](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000114323.7 |
ENSMUSP00000109962.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000114323.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000109962.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000114323](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000109962](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001362209.1 |
NP_001349138.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001362209.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001349138.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001362209](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001349138](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001349138.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001362210.1 |
NP_001349139.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001362210.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001349139.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001362210](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001349139](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001349139.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001362211.1 |
NP_001349140.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001362211.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001349140.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001362211](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001349140](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001349140.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001362212.1 |
NP_001349141.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001362212.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001349141.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001362212](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001349141](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001349141.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_145958.2 |
NP_666070.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_145958.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_666070.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_145958](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_666070](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_666070.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 51790.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1872 nt): ATGTCCACTCAAGAGGAAAGGCAGATCAATACCGAATATGCTGTGTCCTTATTGGAACAGTTGAAACTGT TTTATGAACAACAGTTATTTACTGACATAGTGTTAATTGTTGAGGGCACTGAATTCCCTTGTCATAAGAT GGTTCTTGCAACATGTAGCTCCTATTTCAGGGCCATGTTCATGAGTGGACTAAGTGAAAGCAAGCAGACA CATGTACACCTGAGGAATGTGGACGCTGCCGCCTTGCAGATGATAATAGCTTACGCGTACACAGGGAACT TGGCAGTAAACGACAGCACTGTGGAGCAGCTCTATGAAACAGCTTGCTTCCTGCAGGTAGAAGATGTGTT ACAGCGTTGCCGAGAATATTTAATTAAAAAAATTAATGCAGAGAACTGTGTGCGGCTGCTGAGTTTTGCT GACCTCTTCAGTTGTGAAGAATTAAAGCAGAGTGCAAAGAGGATGGTGGAGCACAAGTTCACGGCTGTGT ACCGCCAGGAAGCCTTCATGCAGCTGTCCCACGACCTCCTCATAGACATCCTCAGCAGCGACAACTTAAA TGTAGAAAAGGAGGAAACCGTGCGAGAGGCTGCCATGCTCTGGCTAGAGTACAACACAGAGTCACGATCC CAGTATTTGTCTTCAGTTCTTAGCCAGATCAGAATTGATGCTCTTTCAGAAGTCACACAAAGAGCTTGGT TTCAAGGTCTCCCACCCAACGATAAGTCTGTTGTGGTTCAGGGTCTTTATAAGTCTATGCCCAAGTTCTT CAAACCCAGACTTGGGATGACTAAGGAGGAAATGATGATTTTCATTGAAGCATCCTCAGAAAACCCTTGT AGTCTTTACTCTTCTGTCTGTTATAGCCCCCAGGCAGAAAAAGTTTACAAGTTATGCAGCCCACCCGCTG ATTTGCATAAGGTTGGGACAGTTGTAACTCCGGATAATGATATTTACATAGCAGGGGGCCAAGTGCCCTT GAAAAACACAAAAACAAATCACAGTAAAACAAGTAAACTGCAGACTGCCTTCCGAACTGTGAATTGCTTT TACTGGTTTGATGCACAACAAAATACCTGGTTTCCAAAGACACCAATGCTTTTTGTCCGTGTGAAGCCAT CTTTGGTTTGCTGTGAAGGCTATATCTATGCAATCGGAGGAGATAGTGTTGGTGGAGAACTTAACCGGAG GACTGTAGAAAGATACGACACTGAGAAGGATGAGTGGACAATGGTGAGCCCTTTGCCTTGTGCATGGCAG TGGAGTGCAGCAGTTGTAGTTCACGACTGCATCTATGTGATGACATTAAACCTCATGTACTGTTACTTTC CAAGATCTGACTCATGGGTAGAAATGGCCATGAGGCAGACTAGCAGATCTTTTGCTTCAGCTGCAGCTTT TGGTGATAAAATTTTCTATATTGGAGGGTTGCATATTGCTACCAATTCTGGCATAAGACTCCCCTCTGGC ACTGTAGATGGGTCTTCAGTAACTGTGGAAATTTATGATGTGAATAAAAATGAATGGAAGATGGCTGCCA ACATCCCTGCTAAAAGGTATTCTGATCCCTGTGTTAGAGCTGTTGTGATCTCAAATTCTCTTTGTGTGTT TATGCGAGAAACCCACTTAAATGAACGAGCTAAGTATGTCACCTACCAGTATGATTTGGAACTTGACCGG TGGTCTCTGCGGCAGCATATATCTGAACGTGTACTGTGGGACCTAGGGAGAGATTTTCGGTGCACTGTGG GGAAACTTTATCCATCCTGTCTTGAAGAATCTCCATGGAAGCCACCAACTTACCTTTTTTCACCAGATGG AACAGAGGAGTTTGAACTGGATGGGGAAATGGTTGCACTTCCGCCTGTATAG
Translation (623 aa): MSTQEERQINTEYAVSLLEQLKLFYEQQLFTDIVLIVEGTEFPCHKMVLATCSSYFRAMFMSGLSESKQT HVHLRNVDAAALQMIIAYAYTGNLAVNDSTVEQLYETACFLQVEDVLQRCREYLIKKINAENCVRLLSFA DLFSCEELKQSAKRMVEHKFTAVYRQEAFMQLSHDLLIDILSSDNLNVEKEETVREAAMLWLEYNTESRS QYLSSVLSQIRIDALSEVTQRAWFQGLPPNDKSVVVQGLYKSMPKFFKPRLGMTKEEMMIFIEASSENPC SLYSSVCYSPQAEKVYKLCSPPADLHKVGTVVTPDNDIYIAGGQVPLKNTKTNHSKTSKLQTAFRTVNCF YWFDAQQNTWFPKTPMLFVRVKPSLVCCEGYIYAIGGDSVGGELNRRTVERYDTEKDEWTMVSPLPCAWQ WSAAVVVHDCIYVMTLNLMYCYFPRSDSWVEMAMRQTSRSFASAAAFGDKIFYIGGLHIATNSGIRLPSG TVDGSSVTVEIYDVNKNEWKMAANIPAKRYSDPCVRAVVISNSLCVFMRETHLNERAKYVTYQYDLELDR WSLRQHISERVLWDLGRDFRCTVGKLYPSCLEESPWKPPTYLFSPDGTEEFELDGEMVALPPV
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