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Report for CCDS15384.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
15384.1 |
Public |
Mus musculus |
1 |
Xpr1 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:19775](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:15384.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:19775](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 15384.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000027741.11 |
ENSMUSP00000027741.5 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000027741.11](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000027741.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000027741](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000027741](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_011273.2 |
NP_035403.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_011273.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_035403.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_011273](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_035403](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_035403.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_035403.1 |
695 |
Q9Z0U0-1 |
695 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 15384.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2088 nt): ATGAAGTTCGCCGAGCACCTCTCCGCGCACATCACTCCCGAGTGGAGGAAGCAGTACATCCAGTATGAGG CATTCAAGGATATGCTGTATTCAGCTCAGGACCAGGCACCTTCAGTTGAAGTTACAGATGAGGATACAGT TAAGAGATATTTTGCCAAGTTTGAAGAAAAGTTTTTCCAAACCTGTGAAAAGGAACTTGCCAAAATCAAC ACATTTTATTCAGAGAAGCTGGCAGAGGCTCAGCGCAGGTTTGCTACACTTCAGAATGAGCTTCAGTCAT CGCTGGATGTGCAGAAAGAAAGCAGTGGTGTCACGACATTGCGACAGCGCAGAAAGCCAGTGTTCCACCT GTCCCACGAGGAGCGTGTCCAACATAGGAACATTAAAGACCTTAAGCTGGCCTTCAGCGAGTTCTACCTC AGTCTCATCCTGCTGCAGAACTATCAGAATCTGAATTTTACAGGGTTTCGGAAAATCCTCAAAAAGCATG ACAAGATCCTGGAAACATCTCGTGGAGCAGATTGGCGAGTGATTCATGTAGAGGTGGCCCCATTTTATAC ATGCAAGAAAATTAACCAGCTCATTTCTGAGACTGAGGCTGTGGTCACCAATGAACTTGAAGATGGTGAC AGACAAAAGGCTATGAAGCGGTTACGGGTCCCTCCATTGGGAGCTGCTCAGCCTGCACCAGCATGGACTA CTTTTAGAGTTGGCCTATTTTGTGGAATATTCATTGTGCTGAATATTACCCTTGTGTTTGCAGCTGTATT TAAACTTGAAACAGATAGAACTGTATGGCCCTTGATAAGAATCTATCGGGGTGGCTTTCTTCTGATTGAA TTCCTTTTTCTACTGGGCATCAACACATATGGTTGGAGACAAGCTGGAGTAAATCATGTCCTCATCTTTG AACTTAATCCAAGAAACAATTTGTCTCATCAGCATCTCTTTGAGATTGCTGGATTCCTGGGGATCTTGTG GTGCCTGAGCCTTCTGGCATGCTTCTTCGCTCCAATTAGTATCATCCCTATATATGTGTATCCACTAGCC CTTTATGGGTTTATGGTCTTCTTTCTTATCAACCCCACCAAAACTTTCTACTATAAATCCAGATTTTGGC TGCTCAAACTTCTGTTTCGAGTATTTACTGCTCCCTTCCATAAGGTAGGCTTTGCTGATTTCTGGCTGGC CGATCAGCTGAACAGCCTGTCAGTGATTCTCATGGACCTGGAATATATGATCTGCTTCTACAGTTTTGAG CTTAAATGGGATGAGAGTAAGGGCCTGTTGCCAAATGATCCACAAGAACCAGAATTTTGCCACAAATATT CATATGGTGTGCGAGCCATTGTTCAATGTATTCCAGCTTGGCTTCGCTTCATCCAGTGCCTGCGCCGGTA CCGTGACACGAGGAGGGCTTTTCCTCATCTAGTAAATGCTGGCAAATACTCCACAACTTTCTTCACCGTG ACATTTGCAGCCCTTTACAGCACTCACGAAGAACAAAATCACTCTGACACCGTGGTGTTCTTTTACCTGT GGGTCTTCTTTTGTATCATCAGTTCCTGCTATACCCTCATCTGGGATCTCAAGATGGACTGGGGTCTCTT TGATAAGAATGCAGGAGAAAACACTTTCCTCCGGGAAGAAATTGTATACCCTCAAAAAGCCTATTACTAC TGTGCCATCATAGAAGATGTGATACTGCGCTTCGCTTGGACTATCCAAATCTCTATTACTGCTACGTTTA AGCCTCATGTTGGGAACATCATTGCTACTGTCTTTGCCCCCCTTGAGGTTTTCCGGCGATTTGTGTGGAA CTTCTTCCGTCTGGAGAACGAGCATCTAAATAACTGTGGTGAATTCCGAGCCGTGCGGGACATCTCTGTG GCCCCCCTCAACGCGGATGACCAGACACTACTTGAGCAGATGATGGACCAGGAGGATGGGGTTCGAAACC GCCAGAAGAACCGGTCGTGGAAGTACAATCAGAGCATATCCCTGCGTAGGCCCCGCCTGGCTTCCCAATC CAAGGCTCGCGACACTAAGGTATTGATAGAAGACACAGATGACGAAGCTAACACTTGA
Translation (695 aa): MKFAEHLSAHITPEWRKQYIQYEAFKDMLYSAQDQAPSVEVTDEDTVKRYFAKFEEKFFQTCEKELAKIN TFYSEKLAEAQRRFATLQNELQSSLDVQKESSGVTTLRQRRKPVFHLSHEERVQHRNIKDLKLAFSEFYL SLILLQNYQNLNFTGFRKILKKHDKILETSRGADWRVIHVEVAPFYTCKKINQLISETEAVVTNELEDGD RQKAMKRLRVPPLGAAQPAPAWTTFRVGLFCGIFIVLNITLVFAAVFKLETDRTVWPLIRIYRGGFLLIE FLFLLGINTYGWRQAGVNHVLIFELNPRNNLSHQHLFEIAGFLGILWCLSLLACFFAPISIIPIYVYPLA LYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLSVILMDLEYMICFYSFE LKWDESKGLLPNDPQEPEFCHKYSYGVRAIVQCIPAWLRFIQCLRRYRDTRRAFPHLVNAGKYSTTFFTV TFAALYSTHEEQNHSDTVVFFYLWVFFCIISSCYTLIWDLKMDWGLFDKNAGENTFLREEIVYPQKAYYY CAIIEDVILRFAWTIQISITATFKPHVGNIIATVFAPLEVFRRFVWNFFRLENEHLNNCGEFRAVRDISV APLNADDQTLLEQMMDQEDGVRNRQKNRSWKYNQSISLRRPRLASQSKARDTKVLIEDTDDEANT
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