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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS46911.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
46911.1 |
Public |
Homo sapiens |
3 |
COL6A6 |
24 |
110 |
108 |
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Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana)
Attributes |
CDS uses downstream AUG |
Sequence IDs included in CCDS 46911.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENST00000358511.11 |
ENSP00000351310.6 |
MANE Select |
Accepted |
alive |
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NCBI |
NM_001102608.3 |
NP_001096078.1 |
MANE Select |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001096078.1 |
2263 |
A6NMZ7-1 |
2263 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 46911.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6792 nt): ATGATGTTGCTAATTTTGTTCCTCGTGATAATTTGTTCCCATATTTCTGTGAACCAAGATTCCGGCCCTG AGTATGCAGATGTTGTGTTTTTGGTGGACAGCTCTGATCGCCTGGGATCCAAGTCCTTCCCATTTGTGAA AATGTTCATCACCAAAATGATCAGCAGTCTCCCCATAGAGGCCGACAAATACCGTGTGGCCCTGGCCCAG TACAGTGATAAACTTCACAGTGAATTCCACCTGAGCACCTTCAAAGGCAGGAGCCCCATGCTGAACCACC TAAGGAAGAACTTTGGATTCATTGGCGGGTCCCTGCAGATAGGAAAGGCTCTTCAGGAGGCTCACAGGAC TTATTTCTCTGCACCCGCAAATGGGAGAGACAAGAAACAGTTTCCCCCAATTCTAGTGGTCCTGGCTTCA TCTGAGTCTGAGGATAATGTGGAAGAGGCATCAAAGGCCCTGCGGAAAGACGGAGTGAAAATCATCTCTG TAGGGGTGCAGAAAGCTTCTGAGGAAAACCTGAAGGCCATGGCCACGTCTCAGTTTCATTTCAACCTTCG GACAGTCAGAGACCTCAGCATGTTTTCCCAAAACATGACACACATCATCAAGGATGTAATAAAGTACAAG GAGGGAGCAGTTGATGACATCTTTGTAGAAGCTTGCCAAGGCCCTTCTATGGCCGATGTTGTGTTCCTAT TGGATATGTCAATCAATGGAAGTGAGGAGAACTTTGACTATCTTAAAGGATTCTTGGAAGAAAGTGTATC TGCCCTTGACATAAAGGAAAATTGCATGAGGGTTGGCCTTGTGGCCTATAGCAATGAGACAAAAGTGATA AATTCACTGAGCATGGGCATAAATAAGTCAGAGGTTCTCCAGCATATACAGAACCTTTCTCCCCGAACTG GGAAGGCCTATACTGGAGCTGCCATCAAAAAGCTCAGGAAGGAAGTTTTTAGTGCACGGAATGGCAGTCG GAAGAATCAGGGGGTGCCCCAGATTGCCGTGCTGGTGACCCACCGAGATTCAGAAGACAACGTGACAAAA GCAGCTGTTAACCTCCGACGGGAGGGTGTGACCATCTTCACCCTGGGCATAGAGGGCGCCAGCGACACCC AGTTGGAAAAGATAGCATCCCACCCTGCTGAGCAGTATGTCTCCAAACTGAAGACCTTCGCTGACCTGGC TGCTCACAACCAGACATTTCTGAAGAAGCTGCGGAACCAAATAACACACACAGTCTCTGTCTTTTCAGAG AGGACTGAAACGCTCAAATCTGGTTGTGTGGACACTGAGGAAGCAGACATCTATCTGCTTATCGATGGCT CAGGGAGCACCCAGGCCACAGATTTCCATGAAATGAAGACGTTCCTGTCAGAGGTGGTAGGGATGTTCAA CATTGCTCCCCATAAGGTGCGGGTTGGGGCCGTTCAGTATGCTGACAGCTGGGACTTGGAATTTGAGATC AATAAATACTCCAACAAGCAGGATTTGGGAAAGGCCATTGAGAATATCAGGCAGATGGGTGGGAATACAA ACACAGGCGCAGCACTGAATTTCACACTGAGTCTGTTGCAAAAAGCAAAGAAGCAGCGAGGAAACAAAGT TCCATGCCACCTTGTTGTCCTGACAAATGGCATGTCCAAGGATAGCATCTTGGAGCCTGCAAACAGACTG AGAGAAGAGCACATCCGAGTTTATGCTATCGGGATCAAGGAGGCCAACCAAACACAGCTGAGAGAAATTG CAGGAGAGGAAAAGAGAGTGTATTACGTGCATGACTTTGATGCATTGAAAGACATAAGAAACCAAGTTGT TCAAGAAATCTGTACTGAAGAAGCTTGCAAAGAGATGAAAGCTGACATCATGTTTCTGGTGGACAGTTCT GGAAGTATAGGACCTGAAAACTTCAGCAAAATGAAAACATTTATGAAAAACCTGGTGAGCAAGTCTCAGA TTGGACCAGATCGGGTGCAAATTGGTGTAGTCCAGTTCAGCGACATCAATAAGGAAGAGTTTCAGCTCAA CAGATTCATGTCCCAAAGCGACATTTCAAATGCAATAGACCAAATGGCTCACATTGGACAAACCACCCTG ACTGGTAGTGCCCTGAGCTTTGTGTCTCAGTACTTCAGCCCCACCAAGGGCGCCCGGCCCAACATCAGAA AGTTTCTCATCCTCATCACGGATGGTGAAGCTCAGGACATAGTAAAGGAACCAGCAGTAGTGCTTCGGCA AGAAGGTGTAATCATCTATTCTGTGGGAGTGTTTGGCTCCAATGTCACCCAGCTTGAGGAGATCAGTGGG AGGCCCGAGATGGTTTTTTATGTTGAGAATTTTGACATTCTGCAGCGCATTGAAGATGATCTTGTTTTTG GAATATGCAGCCCCCGTGAAGAATGCAAGCGGATTGAAGTTTTAGACGTTGTGTTTGTCATTGATAGCTC TGGCAGTATTGACTATGATGAGTATAATATCATGAAGGATTTTATGATTGGCTTAGTGAAAAAAGCTGAT GTGGGCAAGAATCAGGTCCGGTTTGGGGCTCTGAAGTATGCTGATGACCCAGAGGTGCTGTTTTATCTGG ATGACTTTGGCACAAAACTGGAGGTAATTTCAGTGCTCCAGAATGACCAAGCCATGGGTGGCAGTACTTA TACTGCTGAGGCACTGGGCTTCTCAGACCACATGTTCACTGAAGCCCGGGGCAGCCGCCTGAACAAGGGG GTCCCCCAAGTCCTCATTGTGATCACCGATGGGGAATCCCATGATGCTGATAAACTCAATGCCACGGCAA AGGCCTTGCGGGACAAAGGCATTCTTGTCCTGGCTGTGGGGATTGATGGTGCCAATCCCGTGGAGCTGTT AGCCATGGCAGGATCAAGCGACAAGTACTTCTTCGTGGAGACTTTTGGAGGTCTGAAGGGAATATTTTCA GATGTGACAGCCAGTGTCTGCAACTCTTCAAAAGTAGATTGTGAAATTGACAAAGTAGATCTTGTTTTCC TTATGGATGGTTCAACTAGCATTCAGCCAAATGACTTCAAGAAAATGAAGGAATTTCTGGCATCTGTTGT TCAAGACTTTGATGTCAGCCTCAACAGAGTGCGAATAGGAGCGGCCCAGTTTAGCGATACCTATCACCCG GAGTTTCCACTGGGAACTTTCATAGGTGAAAAAGAGATATCATTTCAGATTGAAAACATCAAGCAGATCT TTGGAAACACACACATCGGTGCTGCACTCAGGGAGGTGGAACATTACTTCAGGCCAGACATGGGCAGCAG GATAAATACAGGTACCCCACAGGTGCTGCTGGTCCTTACAGATGGCCAGTCCCAAGACGAGGTGGCCCAG GCCGCGGAAGCCCTGAGACACAGAGGTATCGACATCTACTCCGTGGGCATTGGGGATGTGGATGACCAGC AGCTCATTCAGATCACCGGGACTGCAGAGAAAAAACTGACAGTGCACAACTTCGATGAACTGAAGAAGGT CAATAAAAGGATCGTTCGCAACATCTGTACCACAGCGGGTGAAAGCAACTGTTTCGTGGATGTTGTGGTG GGATTTGATGTCTCAACTCAGGAGAAAGGGCAGACTTTGCTTGAAGGTCAGCCTTGGATGGAAACCTACC TTCAAGACATCTTACGTGCCATCAGCTCCCTCAATGGAGTAAGCTGTGAGGTGGGCACAGAGACTCAGGT CAGTGTGGCTTTTCAAGTGACCAATGCCATGGAAAAATATTCTCCCAAGTTTGAGATCTACAGTGAAAAC ATACTGAATAGCTTGAAGGATATAACAGTTAAAGGACCATCTCTTCTCAATGCAAACCTCTTGGATTCTC TATGGGATACATTTCAGAATAAATCAGCTGCTCGAGGAAAGGTGGTCCTTTTATTTTCAGATGGATTGGA TGATGATGTTGAGAAACTTGAACAAAAATCTGATGAACTTAGAAAAGAAGGCCTGAATGCCCTCATAACT GTTGCTCTGGATGGACCTGCTGATTCAAGTGACTTGGCTGATCTTCCCTATATTGAATTTGGGAAAGGAT TTGAGTACAGGACACAGCTCTCTATTGGCATGAGAGAACTTGGAAGCCGGCTGTCAAAGCAGCTGGTCAA TGTTGCTGAAAGGACATGCTGCTGTTTGTTCTGCAAGTGCATTGGAGGAGATGGCACAATGGGAGATCCT GGACCACCAGGGAAAAGGGGACCTCCAGGTTTTAAAGGCAGTGAAGGCTACCTGGGAGAGGAGGGAATCG CTGGAGAAAGAGGAGCCCCTGGACCAGTGGGAGAGCAAGGTACTAAGGGATGCTATGGCACCAAAGGTCC TAAGGGAAACAGAGGACTAAATGGACAGGAGGGAGAAGTTGGGGAAAATGGAATTGACGGATTAAACGGA GAACAGGGTGATAATGGTCTTCCTGGAAGAAAAGGAGAAAAGGGAGATGAGGGATCTCAGGGAAGCCCAG GGAAGAGAGGGACTCCTGGTGACCGTGGAGCAAAGGGCCTGCGAGGGGATCCCGGAGCTCCTGGAGTTGA CAGTAGCATAGAAGGACCCACAGGCTTGAAAGGAGAACGTGGAAGACAAGGCAGAAGAGGCTGGCCAGGC CCCCCCGGGACACCAGGCTCCAGAAGAAAGACAGCAGCTCATGGCAGAAGGGGACATACAGGCCCACAGG GAACAGCAGGCATCCCAGGACCAGATGGACTTGAAGGCTCCCTGGGACTTAAGGGCCCTCAGGGCCCAAG AGGAGAGGCTGGTGTGAAAGGAGAAAAAGGAGGTGTGGGAAGTAAAGGTCCCCAGGGGCCTCCAGGACCC GGAGGAGAGGCAGGGAATCAAGGCCGTTTGGGAAGCCAAGGAAATAAAGGAGAACCTGGAGATCTGGGAG AAAAAGGAGCTGTTGGCTTTCCTGGTCCTCGTGGCTTGCAGGGCAATGATGGCAGTCCAGGTTATGGTAG TGTCGGACGCAAGGGAGCAAAGGGACAAGAAGGATTCCCTGGAGAAAGTGGACCTAAGGGTGAGATTGGG GACCCTGGTGGTCCAGGAGAGACTGGGCTGAAGGGAGCTAGAGGCAAAATGATATCTGCTGGGCTTCCAG GAGAGATGGGATCCCCTGGGGAACCAGGACCTCCTGGACGTAAGGGTGTGAAAGGAGCCAAAGGCTTGGC TTCATTTTCTACATGTGAGCTCATTCAGTATGTGCGAGACCGCAGTCCTGGCAGGCATGGAAAACCGGAA TGCCCAGTGCACCCAACCGAGTTGGTGTTTGCCCTGGACCACTCCCGGGATGTCACTGAGCAGGAATTTG AGCGGATGAAGGAGATGATGGCTTTCCTGGTGAGAGACATTAAGGTCCGGGAGAACAGCTGCCCCGTGGG AGCGCACATCGCCATCCTCTCCTATAACTCCCACGCCAGGCACCTTGTGCGCTTCTCAGACGCCTACAAG AAGAGTCAACTTCTCAGAGAAATTGAAACTATTCCTTATGAGAGATCCTCTGCCAGCAGGGAGATTGGCA GAGCAATGCGGTTTATTTCCAGGAATGTCTTCAAGCGGACGCTTCCGGGGGCACACACGAGAAAAATCGC CACATTTTTCAGCAGCGGTCAGTCCGCGGATGCCCACTCCATCACCACGGCTGCCATGGAGTTCGGCGCG CTTGAAATCATTCCCGTGGTGATCACTTTCAGCAACGTGCCCTCGGTCAGGCGCGCATTTGCGATTGACG ACACTGGCACATTTCAAGTAATAGTGGTTCCCTCCGGGGCCGACTACATACCAGCATTAGAGAGACTCCA GCGGTGCACTTTCTGCTATGATGTGTGCAAGCCAGATGCTTCTTGTGACCAAGCCAGACCACCCCCTGTG CAGTCTTACATGGATGCTGCTTTCCTTCTGGATGCCTCCCGGAACATGGGAAGTGCTGAATTTGAAGACA TAAGAGCCTTCCTTGGAGCACTATTAGATCACTTTGAAATCACCCCAGAGCCGGAGACTTCTGTCACTGG AGACCGGGTGGCCCTATTGAGCCATGCTCCCCCCGACTTCCTACCCAACACTCAGAAGAGTCCAGTTAGA GCTGAGTTCAATCTTACCACCTACAGAAGTAAGCGCCTCATGAAGAGGCATGTGCACGAGTCAGTTAAAC AACTAAATGGAGATGCTTTTATTGGTCATGCCTTACAGTGGACTCTGGACAATGTATTTTTAAGTACACC CAATCTGAGAAGAAACAAAGTCATATTTGTGATATCTGCTGGGGAAACCAGCCACTTAGATGGGGAAATC TTAAAGAAGGAATCCTTGCGAGCCAAATGTCAGGGATATGCCTTATTTGTGTTTTCCCTTGGCCCTATTT GGGATGACAAGGAACTGGAGGATCTCGCCAGCCACCCTTTGGATCACCACCTGGTCCAGCTTGGCCGAAT TCATAAACCTGACCACAGTTATGGTGTGAAGTTTGTGAAGTCCTTTATAAACTCAATCAGGCGTGCAATC AACAAATATCCACCAATAAACTTAAAAATAAAGTGCAACAGACTTAACTCTATAGATCCAAAGCAGCCCC CACGACCATTCCGAAGCTTTGTTCCTGGACCACTTAAAGCTACCCTCAAAGAAGATGTATTACAGAAGGC AAAATTCTTTCAAGATAAAAAATATCTTTCAAGAGTAGCAAGAAGTGGCAGAGATGATGCTATTCAAAAT TTTATGAGAAGCACCTCCCATACCTTTAAGAATGGAAGGATGATAGAAAGTGCTCCCAAACAACATGATT AA
Translation (2263 aa): MMLLILFLVIICSHISVNQDSGPEYADVVFLVDSSDRLGSKSFPFVKMFITKMISSLPIEADKYRVALAQ YSDKLHSEFHLSTFKGRSPMLNHLRKNFGFIGGSLQIGKALQEAHRTYFSAPANGRDKKQFPPILVVLAS SESEDNVEEASKALRKDGVKIISVGVQKASEENLKAMATSQFHFNLRTVRDLSMFSQNMTHIIKDVIKYK EGAVDDIFVEACQGPSMADVVFLLDMSINGSEENFDYLKGFLEESVSALDIKENCMRVGLVAYSNETKVI NSLSMGINKSEVLQHIQNLSPRTGKAYTGAAIKKLRKEVFSARNGSRKNQGVPQIAVLVTHRDSEDNVTK AAVNLRREGVTIFTLGIEGASDTQLEKIASHPAEQYVSKLKTFADLAAHNQTFLKKLRNQITHTVSVFSE RTETLKSGCVDTEEADIYLLIDGSGSTQATDFHEMKTFLSEVVGMFNIAPHKVRVGAVQYADSWDLEFEI NKYSNKQDLGKAIENIRQMGGNTNTGAALNFTLSLLQKAKKQRGNKVPCHLVVLTNGMSKDSILEPANRL REEHIRVYAIGIKEANQTQLREIAGEEKRVYYVHDFDALKDIRNQVVQEICTEEACKEMKADIMFLVDSS GSIGPENFSKMKTFMKNLVSKSQIGPDRVQIGVVQFSDINKEEFQLNRFMSQSDISNAIDQMAHIGQTTL TGSALSFVSQYFSPTKGARPNIRKFLILITDGEAQDIVKEPAVVLRQEGVIIYSVGVFGSNVTQLEEISG RPEMVFYVENFDILQRIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDYDEYNIMKDFMIGLVKKAD VGKNQVRFGALKYADDPEVLFYLDDFGTKLEVISVLQNDQAMGGSTYTAEALGFSDHMFTEARGSRLNKG VPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIDGANPVELLAMAGSSDKYFFVETFGGLKGIFS DVTASVCNSSKVDCEIDKVDLVFLMDGSTSIQPNDFKKMKEFLASVVQDFDVSLNRVRIGAAQFSDTYHP EFPLGTFIGEKEISFQIENIKQIFGNTHIGAALREVEHYFRPDMGSRINTGTPQVLLVLTDGQSQDEVAQ AAEALRHRGIDIYSVGIGDVDDQQLIQITGTAEKKLTVHNFDELKKVNKRIVRNICTTAGESNCFVDVVV GFDVSTQEKGQTLLEGQPWMETYLQDILRAISSLNGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSEN ILNSLKDITVKGPSLLNANLLDSLWDTFQNKSAARGKVVLLFSDGLDDDVEKLEQKSDELRKEGLNALIT VALDGPADSSDLADLPYIEFGKGFEYRTQLSIGMRELGSRLSKQLVNVAERTCCCLFCKCIGGDGTMGDP GPPGKRGPPGFKGSEGYLGEEGIAGERGAPGPVGEQGTKGCYGTKGPKGNRGLNGQEGEVGENGIDGLNG EQGDNGLPGRKGEKGDEGSQGSPGKRGTPGDRGAKGLRGDPGAPGVDSSIEGPTGLKGERGRQGRRGWPG PPGTPGSRRKTAAHGRRGHTGPQGTAGIPGPDGLEGSLGLKGPQGPRGEAGVKGEKGGVGSKGPQGPPGP GGEAGNQGRLGSQGNKGEPGDLGEKGAVGFPGPRGLQGNDGSPGYGSVGRKGAKGQEGFPGESGPKGEIG DPGGPGETGLKGARGKMISAGLPGEMGSPGEPGPPGRKGVKGAKGLASFSTCELIQYVRDRSPGRHGKPE CPVHPTELVFALDHSRDVTEQEFERMKEMMAFLVRDIKVRENSCPVGAHIAILSYNSHARHLVRFSDAYK KSQLLREIETIPYERSSASREIGRAMRFISRNVFKRTLPGAHTRKIATFFSSGQSADAHSITTAAMEFGA LEIIPVVITFSNVPSVRRAFAIDDTGTFQVIVVPSGADYIPALERLQRCTFCYDVCKPDASCDQARPPPV QSYMDAAFLLDASRNMGSAEFEDIRAFLGALLDHFEITPEPETSVTGDRVALLSHAPPDFLPNTQKSPVR AEFNLTTYRSKRLMKRHVHESVKQLNGDAFIGHALQWTLDNVFLSTPNLRRNKVIFVISAGETSHLDGEI LKKESLRAKCQGYALFVFSLGPIWDDKELEDLASHPLDHHLVQLGRIHKPDHSYGVKFVKSFINSIRRAI NKYPPINLKIKCNRLNSIDPKQPPRPFRSFVPGPLKATLKEDVLQKAKFFQDKKYLSRVARSGRDDAIQN FMRSTSHTFKNGRMIESAPKQHD
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