CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS86245.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
86245.1 |
Public |
Homo sapiens |
11 |
ATM |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:472](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:86245.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:472](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 11 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 86245.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000526567.5 |
ENSP00000480205.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000526567.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000480205.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000526567](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000480205](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000639240.1 |
ENSP00000491585.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000639240.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000491585.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000639240](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000491585](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000638443.1 |
ENSP00000491957.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000638443.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000491957.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000638443](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000491957](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000640388.1 |
ENSP00000492354.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000640388.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000492354.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000640388](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000492354](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000639953.1 |
ENSP00000492487.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000639953.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000492487.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000639953](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000492487](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000683150.1 |
ENSP00000507125.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000683150.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000507125.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000683150](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000507125](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000683914.1 |
ENSP00000507649.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000683914.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000507649.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000683914](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000507649](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000683468.1 |
ENSP00000508178.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000683468.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000508178.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000683468](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000508178](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000682465.1 |
ENSP00000508284.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000682465.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000508284.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000682465](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000508284](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001351835.2 |
NP_001338764.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001351835.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001338764.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001351835](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001338764](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001338764.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001351836.2 |
NP_001338765.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001351836.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001338765.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001351836](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001338765](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001338765.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 86245.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (339 nt): ATGAGTCTAGTACTTAATGATCTGCTTATCTGCTGCCGTCAACTAGAACATGATAGAGCTACAGAACGAA AGAAAGAAGTTGAGAAATTTAAGCGCCTGATTCGAGATCCTGAAACAATTAAACATCTAGATCGGCATTC AGATTCCAAACAAGGAAAATATTTGAATTGGGATGCTGTTTTTAGATTTTTACAGAAATATATTCAGAAA GAAACAGAATGTCTGAGAATAGCAAAACCAAATGTATCAGCCTCAACACAAGCCTCCAGGCAGAAAAAGA TGCAGGAAATCAGTAGTTTGGTCAAATACTTCATCAAATGTGCAAACAGAAGTAAGTGA
Translation (112 aa): MSLVLNDLLICCRQLEHDRATERKKEVEKFKRLIRDPETIKHLDRHSDSKQGKYLNWDAVFRFLQKYIQK ETECLRIAKPNVSASTQASRQKKMQEISSLVKYFIKCANRSK
|