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Report for CCDS13293.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
13293.1 |
Public |
Homo sapiens |
20 |
MANBAL |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:63905](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:13293.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:63905](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 20 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 13293.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000373605.7 |
ENSP00000362707.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000373605.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000362707.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000373605](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000362707](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000373606.8 |
ENSP00000362708.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000373606.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000362708.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000373606](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000362708](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000397151.1 |
ENSP00000380338.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000397151.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000380338.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000397151](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000380338](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000397152.7 |
ENSP00000380339.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000397152.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000380339.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000397152](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000380339](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001003897.2 |
NP_001003897.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001003897.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001003897.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001003897](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001003897](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001003897.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369742.1 |
NP_001356671.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369742.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001356671.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369742](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001356671](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001356671.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369743.1 |
NP_001356672.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369743.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001356672.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369743](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001356672](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001356672.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001376529.1 |
NP_001363458.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001376529.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001363458.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001376529](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001363458](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001363458.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001376530.1 |
NP_001363459.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001376530.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001363459.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001376530](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001363459](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001363459.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001376531.1 |
NP_001363460.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001376531.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001363460.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001376531](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001363460](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001363460.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001376532.1 |
NP_001363461.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001376532.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001363461.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001376532](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001363461](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001363461.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001376533.1 |
NP_001363462.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001376533.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001363462.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001376533](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001363462](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001363462.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001387335.1 |
NP_001374264.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001387335.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001374264.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001387335](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001374264](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001374264.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_022077.4 |
NP_071360.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_022077.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_071360.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_022077](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_071360](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_071360.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 13293.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (258 nt): ATGGCCTCTGACCTAGACTTCTCACCTCCGGAGGTGCCCGAGCCCACTTTCCTGGAGAACCTGCTACGGT ACGGACTCTTCCTGGGAGCCATCTTCCAGCTCATCTGTGTGCTGGCCATCATCGTACCCATTCCCAAGTC CCACGAGGCGGAGGCTGAACCGTCTGAGCCCAGAAGTGCTGAGGTGACGAGGAAGCCCAAGGCTGCTGTT CCTTCTGTGAACAAGAGGCCCAAGAAAGAGACTAAGAAGAAGCGGTAG
Translation (85 aa): MASDLDFSPPEVPEPTFLENLLRYGLFLGAIFQLICVLAIIVPIPKSHEAEAEPSEPRSAEVTRKPKAAV PSVNKRPKKETKKKR
|