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Report for CCDS24053.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
24053.1 |
Public |
Mus musculus |
10 |
Tbxa2r |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:21390](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:24053.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:21390](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 10 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 24053.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000105325.3 |
ENSMUSP00000100962.2 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000105325.3](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000100962.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000105325](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000100962](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000220312.1 |
ENSMUSP00000151447.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000220312.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000151447.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000220312](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000151447](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001277265.1 |
NP_001264194.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001277265.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001264194.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001277265](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001264194](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001264194.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001358512.1 |
NP_001345441.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001358512.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001345441.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001358512](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001345441](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001345441.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_009325.4 |
NP_033351.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_009325.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_033351.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_009325](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_033351](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_033351.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 24053.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1026 nt): ATGTGGCCCAATGGCACCTCGCTGGGGGCCTGCTTTCGCCCGGTGAACATCACGCTGCAGGAGCGACGTG CCATCGCGTCGCCATGGTTCGCTGCGTCCTTTTGCGCGCTGGGCCTGGGGTCCAACCTGCTGGCACTGAG TGTGCTGGCTGGGGCGCGGCCCGGCGCGGGACCCCGCTCCTCCTTCCTCGCTCTGCTGTGCGGCCTTGTT CTCACCGACTTCCTGGGGCTGCTAGTCACCGGCGCCATCGTGGCGTCGCAACACGCTGCCTTGTTGGACT GGCGAGCCACTGACCCCAGCTGCCGCCTGTGCTACTTCATGGGGGTAGCTATGGTGTTCTTCGGGCTGTG TCCCCTGCTCCTGGGGGCCGCCATGGCCTCTGAGCGCTTCGTGGGCATCACACGGCCCTTCTCACGACCC ACGGCCACATCGCGCCGCGCCTGGGCTACTGTCGGGCTGGTGTGGGTGGCGGCCGGGGCACTCGGGCTGC TGCCACTACTGGGGCTTGGCCGCTACAGTGTGCAGTACCCCGGCTCTTGGTGCTTCCTGACACTCGGGAC ACAGCGCGGTGACGTGGTCTTCGGGCTCATATTCGCACTCCTGGGCAGCGCGTCCGTGGGGCTGTCCCTC CTGCTCAACACCGTTAGTGTGGCCACACTCTGCCGGGTCTACCACACGCGCGAGGCCACACAGCGCCCAC GGGACTGCGAGGTGGAGATGATGGTTCAGCTCGTGGGCATCATGGTGGTGGCCACGGTGTGTTGGATGCC CTTGCTGGTCTTCATCATGCAGACTTTGTTGCAGACACCACCTGTCATGAGCTTCTCTGGGCAGCTGTTG CGGGCCACAGAGCACCAGCTGCTCATCTACCTGCGTGTGGCCACCTGGAACCAGATCTTGGACCCCTGGG TCTATATCCTCTTTCGCCGGTCTGTGCTCCGGCGCCTGCATCCGCGGTTCAGTTCACAGCTCCAGGCTGT GTCCTTGCGCCGGCCTCCAGCCCAGGCCATGCTCAGTGGACCCTGA
Translation (341 aa): MWPNGTSLGACFRPVNITLQERRAIASPWFAASFCALGLGSNLLALSVLAGARPGAGPRSSFLALLCGLV LTDFLGLLVTGAIVASQHAALLDWRATDPSCRLCYFMGVAMVFFGLCPLLLGAAMASERFVGITRPFSRP TATSRRAWATVGLVWVAAGALGLLPLLGLGRYSVQYPGSWCFLTLGTQRGDVVFGLIFALLGSASVGLSL LLNTVSVATLCRVYHTREATQRPRDCEVEMMVQLVGIMVVATVCWMPLLVFIMQTLLQTPPVMSFSGQLL RATEHQLLIYLRVATWNQILDPWVYILFRRSVLRRLHPRFSSQLQAVSLRRPPAQAMLSGP
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