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Report for CCDS35713.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
35713.1 |
Public |
Mus musculus |
1 |
Mybph |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:53311](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:35713.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:53311](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 35713.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000038445.12 |
ENSMUSP00000042195.6 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000038445.12](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000042195.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000038445](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000042195](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000191577.1 |
ENSMUSP00000141104.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000191577.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000141104.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000191577](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000141104](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001357515.1 |
NP_001344444.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001357515.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001344444.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001357515](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001344444](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001344444.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_016749.2 |
NP_058029.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_016749.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_058029.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_016749](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_058029](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_058029.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 35713.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1452 nt): ATGACAGGAAAAGCCACCTCTGAGGCTTCTGTCTCTACTCCAGAGGAGACAGCACCTGAGCCTGCCAAGG TGCCCACTACAGAGCCTTCTGGAGAGGTGGCAGCATCAGAGTCCACCGGGCAAGAGCAGGCTCCAGAGCC ACAGAAGCCTCAGGCACAGGATCCTGCAGCTCCTGCAGCTTCTGCCATGCCCGCAGCCACTAAGCCTGAA CCTCCGAGTGAAGATGTCCCCAGTGCCCCACTGCGGCTGACCTTGGAGGATGTGAGCCACAGCTCCTTGA CTGTGAGCTGGGAGCCCCCCGAGAAGCTGGGCAAACTGGGGCTTCAAGGCTATGTGTTGGAGTTCTGTCG AGAGGGAGCCTCAGAATGGGTGCCTGTGAATCCCCGGCCCGTGATGGTGACCCAGCAGACGGTTCGAAAC CTGGCCCTGGGAGACAAGTTCTTCCTGCGTGTGACTGCAGTAAGCTCAGCAGGGGCAGGCCCTCCAGCCG TTCTGGACCAGCCTGTCCACATCCAAGAGATCACTGAAGCCCCCAAGATCCGTGTTCCCCGACACCTTCG TCAGACCTACATCCGCCAGGTGGGAGAGTCAGTCAACCTGCAAATCCCCTTCCAGGGGAAGCCCAAGCCA CAGGTCTCTTGGACCCACAATGGCCACGCTCTGGACAACCAGAGAGTTAATGTGCGCAGCGGGGACCAGG ACTCCATCCTCTTCATTCGCTCTGCTCAGCGCGCAGACTCAGGCCGCTATGAGCTCACCGTGCATCTGGA AGGCTTGGAAGCCAAGGCCAGCATTGACATCCTGGTGATTGAGAAGCCCGGGCCCCCGAGCAGCATCAAG CTACTGGATGTCTGGGGTTGCAATGCTGCCCTCGAGTGGACACCACCCCAGGACACAGGCAACACAGAGC TCCTGGGCTACACAGTACAGAAGGCAGACAAAAGGACAGGGCAATGGTTCACAGTGTTGGAGCGCTATCA CCCCACCACCTGCACCATCTCAGACCTCATCATTGGCAACTCGTACTCTTTTCGGGTCTTCTCAGAAAAC CTGTGTGGCCTCAGTGACTTAGCCACCACCACCAAGGAGCTGGCTCACATCCACAAGGCAGATATTACTG CCAAACCTAGAGAGTTTATTGAGCGAGACTTCTCAGAAGCGCCCTCGTTCACCCAGCCCCTGGCTGACCA TACCTCCACTCCTGGCTATAGCACGCAGCTTTTCTGCAGCGTCCGAGCATCACCTAAGCCCAAGATCATC TGGATGAAAAACAAGATGGACATCCAGGGTGACCCCAAGTACCGTGCCGTCTCCGAGCAAGGGGTCTGCA CCCTGGAGATCCGGAAGCCCAGCCCCTTTGATTCTGGGGTCTACACTTGCAAGGCCATCAACGTGCTAGG GGAGGCCTCTGTGGATTGTCGGCTGGAGGTTAAAGCTTCTGCCACACACTAA
Translation (483 aa): MTGKATSEASVSTPEETAPEPAKVPTTEPSGEVAASESTGQEQAPEPQKPQAQDPAAPAASAMPAATKPE PPSEDVPSAPLRLTLEDVSHSSLTVSWEPPEKLGKLGLQGYVLEFCREGASEWVPVNPRPVMVTQQTVRN LALGDKFFLRVTAVSSAGAGPPAVLDQPVHIQEITEAPKIRVPRHLRQTYIRQVGESVNLQIPFQGKPKP QVSWTHNGHALDNQRVNVRSGDQDSILFIRSAQRADSGRYELTVHLEGLEAKASIDILVIEKPGPPSSIK LLDVWGCNAALEWTPPQDTGNTELLGYTVQKADKRTGQWFTVLERYHPTTCTISDLIIGNSYSFRVFSEN LCGLSDLATTTKELAHIHKADITAKPREFIERDFSEAPSFTQPLADHTSTPGYSTQLFCSVRASPKPKII WMKNKMDIQGDPKYRAVSEQGVCTLEIRKPSPFDSGVYTCKAINVLGEASVDCRLEVKASATH
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