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Report for CCDS39490.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
39490.1 |
Public |
Mus musculus |
6 |
Tax1bp1 |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 39490.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000080723.10 |
ENSMUSP00000079548.4 |
Accepted |
alive |
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NCBI |
NM_001355596.1 |
NP_001342525.1 |
Accepted |
alive |
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NCBI |
NM_025816.3 |
NP_080092.2 |
Accepted |
alive |
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Chromosomal Locations for CCDS 39490.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2445 nt): ATGACATCCTTTCAAGAAGTCCAATTGCAGACTTCCAATTTTGCCCATGTCATCTTTCAAAATGTGGCTA AAAGTTACCTTCCTAATGCACACTTGGAGTGCCATTACACCTTAACTCCGTATATCCATCCACACTCCAA AGATTGGGTTGGTATATTCAAGGTTGGATGGAGTACTGCTCGTGACTATTACACATTTTTATGGTCTCCT ATGCCTGAACATTATGTGGAAGGATCAACAGTCAATTGTGTACTAGCATTTCAAGGATATTACCTTCCAA ATGATGATGGAGAATTTTATCAGTTCTGTTACGTCACCCATAAGGGTGAAATTCGTGGAGCAAGTACTCC TTTCCAGTTCCGAGCTGCTTCTCCAGTTGAAGAGCTGCTCACTATGGAAGATGAAGGCAATTCCGATATG TTGGTGGTAACCACAAAAGCTGGCCTTCTTGAGCTGAAAATTGAGAAGACCCTGAAAGAAAAAGAAGAAT TGTTAAAGTTGATAGCTGTTCTTGAAAAAGAAACAGCACAGCTGAGAGAACAAGTTGGAAGAATGGAGAG AGAACTGAGCCAGGAGAAAGGGCGGTGTGAGCAATTGCAGGCTGAGCAGAAGGGCCTTCTTGAAGTATCA CAAAGTTTGAGAGTGGAAAACGAAGAGTTTATGAAGAGATACAGTGATGCTACAGCTAAAGTTCAACAGC TTGAAGAGGACATTGTATCAGTGACACATAAAGCCATTGAAAAAGAAACTGACCTAGACAGTTTGAAGGA TAAGCTCAGGAAGGCACAGCATGAGAGAGAGCAGCTTGAATGTCAGCTGCAGACAGAAAAGGATGAGAAG GAGCTGTATAAGGTACATTTGAAGAATACAGAAATAGAAAATACGAAGCTTGTGTCAGAGATACAGACTT TAAAGAATTTAGATGGAAACAAAGAAAGCATGATTACCCATTTCAAAGAAGAGATTAGCAAACTGCAGTC CTGCTTGGCTGACAAGGAAAATTTGTACAGAGCTCTCCTGCTTACAACCTCAAATAAAGAAGATACATTA TTTTTAAAGGAGCAACTTCGCAAAGCGGAGGAACAAGTCCAGGCAACACGGCAAGAACTTATCTTTCTGA CTAAAGAGCTCAGTGATGCAGTGAATGTGCGAGATAAAACTATGGCAGATCTGCATACTGCACGCTTAGA AAATGAGAGAGTGAAGAAGCAGCTAGCCGACACACTGGCAGAGCTGCAGCTACATGCTGTAAAGAAAGAT CAGGAAAAGACTGATACCCTGGAACATGAACTGAGAAGAGAAGTTGAAGATCTGAAACTCCGTCTTCAGA TGGCTGCAGATCATTACAGAGAAAAGTTTAAGGAGTGCCAGAGGCTCCAAAAGCAAATAAACAAACTTTC AGACCAGGCAGCGAGTACTAACAGTGTCTTCACAAAGAAAATGGGGAGTCAGCAGAAAGTGAACGATGCT TCAATAAATACAGACCCGGCTGCCTCTACTTCTGCTTCTGCCGTGGATGTAAAGCCAGCAGCGTCATGTG CAGAGACAGGCTTTGATATGTCAACAAAGGATCATGTCTGTGAAATGACTAAAGAAATTGCTGAGAAAAT AGAAAAGTATAATAAGTGTAAACAACTCTTGCAGGATGAGAAAACTAAGTGCAATAAATACGCTGAAGAA CTTGCCAAAATGGAGCTGAAGTGGAAAGAACAAGTGAAAATTGCTGAAAATGTAAAACTTGAACTAGCTG AAGTAGAGGATAACTACAAAGTTCAGCTGGCGGAGAAAGAGAAAGAAATAAATGGTCTGGCTTCATATTT GGAAAATCTCTCCAGGGAGAAGGAACTTACAAAGAGTTTAGAAGATCAAAAAGGAAGGAAATTGGAAGGC CAGAGCCCTCAACAAGTCTCAAGGTGTCTCAACACATGTTCTGAGCAAAATGGGCTCCTTCCTCCACTGT CAAGTGCACAGCCAGTTCTTCAGTATGGCAACCCTTACTCAGCACAGGAAACAAGAGATGGAGCAGATGG TGCTTTTTATCCAGATGAAATCCAAAGGCCACCTGTGCGAGTCCCATCTTGGGAAGACAATGTTGTCTGT AGCCAGCCTGCTCGAAACCTTAGCCGGCCGGATGGTTTAGAGGACCCCGAAGACAGCAGAGAAGACGAAA ATGTGCCCATTCCTCCTGATCCAGCAAACCAGCACTTACGTAGTCATGGAGCAGGCTTTTGCTTTGATTC CAGCTTTGATGTTCACAAGAAATGTCCCCTCTGTGAATTAATGTTCCCTCCTAACTACGATCAGACCAAA TTTGAAGAACACGTTGAAAGTCACTGGAAGGTGTGTCCAATGTGCAGCGAGCAGTTCCCGCCGGACTACG ACCAGCAGGGGTTTGAAAGGCATGTTCAGACCCATTTTGATCAGAATGTTCTCAACTTCGACTAG
Translation (814 aa): MTSFQEVQLQTSNFAHVIFQNVAKSYLPNAHLECHYTLTPYIHPHSKDWVGIFKVGWSTARDYYTFLWSP MPEHYVEGSTVNCVLAFQGYYLPNDDGEFYQFCYVTHKGEIRGASTPFQFRAASPVEELLTMEDEGNSDM LVVTTKAGLLELKIEKTLKEKEELLKLIAVLEKETAQLREQVGRMERELSQEKGRCEQLQAEQKGLLEVS QSLRVENEEFMKRYSDATAKVQQLEEDIVSVTHKAIEKETDLDSLKDKLRKAQHEREQLECQLQTEKDEK ELYKVHLKNTEIENTKLVSEIQTLKNLDGNKESMITHFKEEISKLQSCLADKENLYRALLLTTSNKEDTL FLKEQLRKAEEQVQATRQELIFLTKELSDAVNVRDKTMADLHTARLENERVKKQLADTLAELQLHAVKKD QEKTDTLEHELRREVEDLKLRLQMAADHYREKFKECQRLQKQINKLSDQAASTNSVFTKKMGSQQKVNDA SINTDPAASTSASAVDVKPAASCAETGFDMSTKDHVCEMTKEIAEKIEKYNKCKQLLQDEKTKCNKYAEE LAKMELKWKEQVKIAENVKLELAEVEDNYKVQLAEKEKEINGLASYLENLSREKELTKSLEDQKGRKLEG QSPQQVSRCLNTCSEQNGLLPPLSSAQPVLQYGNPYSAQETRDGADGAFYPDEIQRPPVRVPSWEDNVVC SQPARNLSRPDGLEDPEDSREDENVPIPPDPANQHLRSHGAGFCFDSSFDVHKKCPLCELMFPPNYDQTK FEEHVESHWKVCPMCSEQFPPDYDQQGFERHVQTHFDQNVLNFD
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