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Report for CCDS89026.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89026.1 Public Mus musculus 17 Prr35 23 108 98 CCDS HistoryNCBI Gene:100034748Re-query CCDS DB by CCDS ID:89026.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89026.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000162431.1 ENSMUSP00000125106.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000162431.1Link to Ensembl Protein Viewer:ENSMUSP00000125106.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000162431Re-query CCDS DB by Protein ID:ENSMUSP00000125106
Original member Current member NCBI NM_001358019.1 NP_001344948.1 Accepted alive Link to Nucleotide Sequence:NM_001358019.1Link to Protein Sequence:NP_001344948.1Re-query CCDS DB by Nucleotide ID:NM_001358019Re-query CCDS DB by Protein ID:NP_001344948Link to BLAST:NP_001344948.1

Chromosomal Locations for CCDS 89026.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 25946596 25947241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25947492 25948561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1716 nt):
ATGTCTCGAGAGGCAGGTTCATGCCGAGTGGGCACGGGGACAAGGGCACGGTCACGGAAGCCCAAGAAGC
CACATTATATCCCACGGCCCTGGGGCAAACCCTACAACTATAAGTGCTTCCAGTGCCCCTTCACCTGCCT
GGAGAAGTCACATCTTTATAACCACATGAAGTACAGCCTCTGCAAAGACTCCCTCTCTCTACTGTTAGAC
TCCCCTGACTGGGCATGCCGCCGTGCGCCCCCCTCACCCAGGCCTCGGGTGCCCACCCCCAACTGCTCCA
CAGACTTCTCAGACCCTAGTAGCAAGCCAACTGAGCCAGATCTCATTGTCACTGACAGCTTTTCCCAGCG
TCGTTCTGGCAGGGGCCCCAAACCTGGACCAGAGGAGTCGCCAGGGTCACTGCCCCCACTGGCTAGACCC
ATCCGGAAGGGTCCAGGCACCAGTGGCCTTTTGGCAGAGTCATGGAAGCCAGGACTGAGTGGTGGCATGC
TGAGTGGGACTTTAGGGACTATAGCTTCAACCCCAGGCTCTGAGAGTAGTGTCCCCTGCTACCCACCACC
TGCCCAGGGTGAGTTCCCTGAAGCCCAGAGCCTCCACTTATCATTGCTGGGTGTCAACTACCCTCTTGGC
CCAGGCCTCTTTTCCTATCTGGGGCCCTCACTGGCTGCTGCTGCAGCCCACATGCCCTTCTTGGCCTCAG
CAAGCCCTTTGCTGCCCCCCACAGCCTTCCCAGCCCCACAGACACCCGAGCGTCCAGGCCTGGCCCCCCG
CCTGTACTACCCACTACTACTAGAACACAGCCTAGGACAATCATCAGGCAGGGCTGCCCCTGCCAAGTCC
TCTGTGCCCCTCAAGGGGCCTCCTGGGGCTCTGTCTGCTCCTGGGCTGCTGAAGGTGCCTGTGCCAGGGC
CCGGGGGACCCTGGCCCCATGGTACTTCCAGAGACCCAGGGCATGAAGGAGAGCTGGGGAGAGTGACTCA
GAGCAACCCGCAGAAGAGGCTGCCCACGGGCAACATGCCTGAGCTCCCAAAGGCCCCCTTGAACCTGGCA
AAATTTGGCTGTCAGAGCAGCCTGCCGACAGGCTCCTCCCTCTTACTCTGGCCTGAGGACAAGGAGCCAG
GTGACCCTGAGGCCTCAGGTCCTGAGTTCCACCTTCTGCAGCATCCACAAGGCCAAGGGCTAGGAAGTAC
AGTCCCAGTGGGAGAGGACCTGACCCAGGCCTTTGGTGACTATGCCAGAGTGGAGCAGTGCTTGGGGCAG
CTGGCACCAGCTGGGGGTCTAGCCCCCAGACCTCTTCGGGAGCAGCTTGGCAAGATTCGCCGGGAGCTGT
TCACTATCCATCAGGCGCTGGCCCGGGCTGCTCGTCCACTGGACACACCCTTGGACCTCTCAGTGAAGCG
GGTACCTACCAAGGGAACTGAGGCACCCTCAGAATCCTGGAGGCTGCATGATCCAGGCCCTGTGCTGGCC
AGGGGGACCTCAGAGCCCTCCAGCATACTGGGTCCAGTACTTGAGTCTTTCTCGAGCCGCACCACCAAGT
GTGAGGCTGACTCCAGTGTCCCTCCTCCTGTCCTCCCCCTCCAGGCCCCCGAGGACCCTGTCATTCCTGG
TAGTGGCTGGGGTAATCGGCTTGGAGCTGGCAGCTCCCAGACCCCTAAAGATACCCCGAGCTTACAGATC
CTCCCAAGTGCTGACTTCTGTTCACAGCCACCATAG

Translation (571 aa):
MSREAGSCRVGTGTRARSRKPKKPHYIPRPWGKPYNYKCFQCPFTCLEKSHLYNHMKYSLCKDSLSLLLD
SPDWACRRAPPSPRPRVPTPNCSTDFSDPSSKPTEPDLIVTDSFSQRRSGRGPKPGPEESPGSLPPLARP
IRKGPGTSGLLAESWKPGLSGGMLSGTLGTIASTPGSESSVPCYPPPAQGEFPEAQSLHLSLLGVNYPLG
PGLFSYLGPSLAAAAAHMPFLASASPLLPPTAFPAPQTPERPGLAPRLYYPLLLEHSLGQSSGRAAPAKS
SVPLKGPPGALSAPGLLKVPVPGPGGPWPHGTSRDPGHEGELGRVTQSNPQKRLPTGNMPELPKAPLNLA
KFGCQSSLPTGSSLLLWPEDKEPGDPEASGPEFHLLQHPQGQGLGSTVPVGEDLTQAFGDYARVEQCLGQ
LAPAGGLAPRPLREQLGKIRRELFTIHQALARAARPLDTPLDLSVKRVPTKGTEAPSESWRLHDPGPVLA
RGTSEPSSILGPVLESFSSRTTKCEADSSVPPPVLPLQAPEDPVIPGSGWGNRLGAGSSQTPKDTPSLQI
LPSADFCSQPP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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