NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS5783.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5783.1 Public Homo sapiens 7 AASS 24 110 108 CCDS HistoryNCBI Gene:10157Re-query CCDS DB by CCDS ID:5783.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5783.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393376.5 ENSP00000377040.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393376.5Link to Ensembl Protein Viewer:ENSP00000377040.1Re-query CCDS DB by Nucleotide ID:ENST00000393376Re-query CCDS DB by Protein ID:ENSP00000377040
Original member Current member EBI ENST00000417368.7 ENSP00000403768.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000417368.7Link to Ensembl Protein Viewer:ENSP00000403768.2Re-query CCDS DB by Nucleotide ID:ENST00000417368Re-query CCDS DB by Protein ID:ENSP00000403768
Original member Current member EBI ENST00000679511.1 ENSP00000505381.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679511.1Link to Ensembl Protein Viewer:ENSP00000505381.1Re-query CCDS DB by Nucleotide ID:ENST00000679511Re-query CCDS DB by Protein ID:ENSP00000505381
Original member Current member EBI ENST00000679864.1 ENSP00000505958.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679864.1Link to Ensembl Protein Viewer:ENSP00000505958.1Re-query CCDS DB by Nucleotide ID:ENST00000679864Re-query CCDS DB by Protein ID:ENSP00000505958
Original member Current member NCBI NM_005763.4 NP_005754.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005763.4Link to Protein Sequence:NP_005754.2Re-query CCDS DB by Nucleotide ID:NM_005763Re-query CCDS DB by Protein ID:NP_005754Link to BLAST:NP_005754.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005754.2 926 Q9UDR5 926 100% 0 0

Chromosomal Locations for CCDS 5783.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 122076489 122076607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122077838 122078014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122078862 122078950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122079597 122079712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122081500 122081595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122086012 122086179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122091703 122091843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122092843 122092951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122093048 122093158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122098450 122098576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122098745 122098866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122101371 122101438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122101621 122101680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122113118 122113229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122113598 122113720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122115074 122115222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122116633 122116760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122116879 122116957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122118307 122118453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122118563 122118630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122126375 122126459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122129361 122129537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122133517 122133726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2781 nt):
ATGCTGCAAGTACATAGGACTGGACTGGGCAGGCTGGGGGTCAGCCTCTCCAAGGGTCTTCACCACAAAG
CT
GTGTTGGCCGTCCGGAGGGAGGATGTGAACGCCTGGGAGAGAAGGGCCCCGCTAGCTCCCAAGCACAT
C
AAAGGCATCACCAATCTGGGATACAAGGTCTTGATACAGCCTTCGAATCGGCGGGCCATTCATGATAAG
GAC
TATGTCAAAGCTGGTGGCATTCTTCAGGAGGATATTTCTGAAGCTTGTCTAATTTTAGGAGTTAAAA
GA
CCTCCAGAGGAAAAATTAATGTCCAGGAAGACTTATGCATTTTTCTCCCACACAATAAAAGCTCAGGA
G
GCCAATATGGGCTTGTTGGATGAGATTCTAAAACAGGAAATTCGCCTTATTGATTATGAGAAAATGGTG
GAT
CATAGAGGAGTACGGGTAGTGGCATTTGGACAGTGGGCTGGTGTGGCAGGAATGATCAACATTTTAC
AT
GGAATGGGTTTAAGGCTCCTTGCTTTGGGACATCACACACCTTTTATGCACATTGGCATGGCTCATAA
C
TACAGGAATAGCAGTCAGGCTGTGCAAGCTGTCCGTGATGCTGGCTATGAAATATCTTTGGGTTTGATG
CCT
AAGTCAATAGGACCCTTAACATTTGTGTTCACAGGAACTGGTAATGTTTCTAAGGGAGCCCAAGCAA
TC
TTTAATGAGCTACCTTGTGAATATGTGGAGCCCCATGAATTAAAAGAAGTTTCCCAAACTGGAGACCT
C
AGAAAAGTGTATGGGACGGTGTTAAGTCGTCATCATCATCTTGTCAGGAAAACAGATGCTGTGTATGAT
CCT
GCAGAGTATGACAAACATCCGGAGCGCTACATAAGTCGTTTTAATACTGATATTGCACCCTATACAA
CT
TGCTTAATTAATGGAATCTACTGGGAACAAAACACTCCTCGCCTCCTAACCCGCCAAGATGCTCAGAG
T
CTCCTGGCTCCGGGCAAGTTCTCACCTGCTGGTGTGGAAGGCTGCCCTGCATTACCACACAAACTCGTG
GCA
ATATGTGACATTTCAGCTGACACAGGAGGGTCTATAGAGTTTATGACTGAGTGTACAACAATAGAGC
AT
CCCTTTTGCATGTATGATGCAGACCAGCATATTATTCATGACAGTGTTGAAGGCTCGGGGATCCTGAT
G
TGTTCCATTGACAATTTGCCGGCACAGCTCCCAATTGAAGCTACAGAATGCTTTGGAGACATGCTTTAC
CCT
TATGTTGAAGAAATGATATTATCAGACGCGACACAGCCTCTTGAAAGTCAGAATTTTTCTCCTGTGG
TG
AGAGATGCAGTGATTACATCCAACGGTACATTACCTGATAAATATAAATATATCCAGACACTCCGGGA
G
AGCAGGGAACGTGCTCAGTCACTTTCAATGGGCACCAGGAGAAAGGTTTTGGTTCTTGGATCTGGCTAC
ATA
TCTGAGCCTGTATTAGAATATTTATCAAGAGATGGCAATATAGAAATAACAGTAGGATCTGACATGA
AG
AATCAAATTGAACAGTTAGGCAAGAAATATAATATTAATCCTGTTAGCATGGACATTTGTAAACAAGA
A
GAGAAGCTGGGCTTCTTGGTGGCAAAACAGGATCTTGTCATCAGCTTGTTGCCTTATGTATTGCACCCT
CTT
GTGGCCAAGGCCTGCATCACAAACAAAGTTAACATGGTCACTGCAAGCTACATCACACCAGCACTAA
AA
GAATTGGAAAAGAGTGTGGAAGATGCTGGCATCACAATCATTGGTGAATTGGGATTGGACCCTGGTCT
G
GATCACATGTTAGCAATGGAAACAATAGATAAAGCCAAGGAAGTGGGAGCCACGATTGAATCATATATT
TCC
TACTGTGGTGGGCTTCCAGCCCCTGAACATTCAAACAATCCATTGAGATATAAATTTAGCTGGAGTC
CA
GTGGGAGTTTTGATGAATGTAATGCAGTCTGCCACCTATCTGCTCGATGGAAAGGTTGTGAATGTTGC
A
GGAGGCATCTCCTTTCTTGATGCCGTTACGTCCATGGATTTTTTTCCAGGATTAAATTTGGAAGGCTAT
CCT
AACAGAGACAGTACGAAATATGCTGAGATTTATGGCATTTCTTCTGCTCACACTTTGTTGCGGGGGA
CA
CTGAGATATAAGGGATATATGAAAGCTTTGAATGGATTTGTAAAATTAGGTCTTATAAACAGAGAAGC
G
CTTCCTGCCTTTAGACCTGAGGCCAACCCTCTCACCTGGAAACAACTCCTCTGTGACCTAGTTGGGATT
TCA
CCCTCCTCTGAGCATGATGTGTTGAAGGAAGCTGTTCTTAAGAAACTAGGAGGAGACAATACCCAGT
TG
GAGGCTGCTGAATGGTTGGGCTTACTTGGGGATGAACAAGTTCCTCAGGCAGAGTCCATTCTGGATGC
C
CTCTCCAAGCATTTGGTCATGAAGCTTTCCTATGGTCCTGAAGAAAAAGATATGATTGTGATGAGAGAC
AGC
TTTGGAATCAGACATCCTTCTGGACATTTAGAACATAAAACGATTGATCTTGTGGCTTATGGGGACA
TC
AATGGCTTTTCAGCCATGGCTAAAACCGTGGGGTTACCCACCGCCATGGCAGCCAAAATGTTGCTTGA
T
GGTGAAATTGGAGCCAAAGGCCTAATGGGGCCCTTTTCAAAGGAGATCTATGGACCAATATTGGAGCGA
ATT
AAAGCAGAAGGCATTATATATACTACACAGAGTACAATTAAACCATAA


Translation (926 aa):
MLQVHRTGLGRLGVSLSKGLHHKAVLAVRREDVNAWERRAPLAPKHIKGITNLGYKVLIQPSNRRAIHDK
D
YVKAGGILQEDISEACLILGVKRPPEEKLMSRKTYAFFSHTIKAQEANMGLLDEILKQ
EIRLIDYEKMV
D
HRGVRVVAFGQWAGVA
GMINILHGMGLRLLALGHHTPFMHIGMAHNYRNSSQAVQAVRDAGYEISLGLM
P
KSIGPLTFVFTGTGNVSK
GAQAIFNELPCEYVEPHELKEVSQTGDLRKVYGTVLSRHHHLVRKTDAVYD
P
AEYDKHPERYISRFNTD
IAPYTTCLINGIYWEQNTPRLLTRQDAQSLLAPGKFSPAGVEGCPALPHKLV
A
ICDISADTGGSIEFMTECTTIEHPFCMYDADQHIIHD
SVEGSGILMCSIDNLPAQLPIEATECFGDMLY
P
YVEEM
ILSDATQPLESQNFSPVVRDAVITSNGTLPDKYKYIQTLRESRERAQSLSMGTRRKVLVLGSGY
I
SEPVLEYLSRDGNIEITV
GSDMKNQIEQLGKKYNINPVSMDICKQEEKLGFLVAKQDLVISLLPYVLHP
L
VAKACITNKVNMVTASYITPALKELEK
SVEDAGITIIGELGLDPGLDHMLAMETIDKAKEVGATIESYI
S
YCGGLPAPEHSNNPLRYKFSWSPVGVLMNVMQSATYLLDGK
VVNVAGGISFLDAVTSMDFFPGLNLEGY
P
NRDSTKYAEIYGISSAHTLLRGTLRYK
GYMKALNGFVKLGLINREALPAFRPEANPLTWKQLLCDLVGI
S
PSSEHDVLKEAVLKKLGGDNTQLEAAE
WLGLLGDEQVPQAESILDALSKHLVMKLSYGPEEKDMIVMRD
S
FGIRHPSGHLEHKTIDLVAYGDINGFSAMAKTVGLPTAMAAKMLLD
GEIGAKGLMGPFSKEIYGPILER
I
KAEGIIYTTQSTIKP




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser