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Report for CCDS13110.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
13110.1 |
Public |
Homo sapiens |
20 |
SNAP25 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:6616](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:13110.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:6616](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 20 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 13110.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000254976.7 |
ENSP00000254976.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000254976.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000254976.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000254976](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000254976](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000691665.1 |
ENSP00000508541.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000691665.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000508541.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000691665](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000508541](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000685131.1 |
ENSP00000508837.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000685131.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000508837.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000685131](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000508837](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000692411.1 |
ENSP00000508939.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000692411.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000508939.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000692411](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000508939](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000690812.1 |
ENSP00000509287.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000690812.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000509287.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000690812](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000509287](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000689757.1 |
ENSP00000509312.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000689757.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000509312.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000689757](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000509312](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000691353.1 |
ENSP00000509759.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000691353.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000509759.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000691353](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000509759](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000691161.1 |
ENSP00000510109.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000691161.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000510109.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000691161](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000510109](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000687785.1 |
ENSP00000510219.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000687785.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000510219.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000687785](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000510219](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000693325.1 |
ENSP00000510558.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000693325.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000510558.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000693325](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000510558](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000689858.1 |
ENSP00000510663.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000689858.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000510663.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000689858](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000510663](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001322903.2 |
NP_001309832.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001322903.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001309832.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001322903](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001309832](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001309832.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001322904.2 |
NP_001309833.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001322904.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001309833.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001322904](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001309833](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001309833.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001322905.2 |
NP_001309834.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001322905.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001309834.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001322905](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001309834](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001309834.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001322906.2 |
NP_001309835.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001322906.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001309835.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001322906](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001309835](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001309835.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001322907.2 |
NP_001309836.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001322907.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001309836.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001322907](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001309836](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001309836.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001322908.2 |
NP_001309837.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001322908.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001309837.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001322908](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001309837](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001309837.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001322909.2 |
NP_001309838.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001322909.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001309838.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001322909](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001309838](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001309838.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001322910.2 |
NP_001309839.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001322910.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001309839.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001322910](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001309839](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001309839.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_130811.4 |
NP_570824.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_130811.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_570824.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_130811](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_570824](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_570824.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 13110.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (621 nt): ATGGCCGAAGACGCAGACATGCGCAATGAGCTGGAGGAGATGCAGCGAAGGGCTGACCAGTTGGCTGATG AGTCGCTGGAAAGCACCCGTCGTATGCTGCAACTGGTTGAAGAGAGTAAAGATGCTGGTATCAGGACTTT GGTTATGTTGGATGAACAAGGAGAACAACTGGAACGCATTGAGGAAGGGATGGACCAAATCAATAAGGAC ATGAAAGAAGCAGAAAAGAATTTGACGGACCTAGGAAAATTCTGCGGGCTTTGTGTGTGTCCCTGTAACA AGCTTAAATCAAGTGATGCTTACAAAAAAGCCTGGGGCAATAATCAGGACGGAGTGGTGGCCAGCCAGCC TGCTCGTGTAGTGGACGAACGGGAGCAGATGGCCATCAGTGGCGGCTTCATCCGCAGGGTAACAAATGAT GCCCGAGAAAATGAAATGGATGAAAACCTAGAGCAGGTGAGCGGCATCATCGGGAACCTCCGTCACATGG CCCTGGATATGGGCAATGAGATCGATACACAGAATCGCCAGATCGACAGGATCATGGAGAAGGCTGATTC CAACAAAACCAGAATTGATGAGGCCAACCAACGTGCAACAAAGATGCTGGGAAGTGGTTAA
Translation (206 aa): MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKD MKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTND ARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG
|