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Report for CCDS82039.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82039.1 Public Homo sapiens 17 ARRB2 24 110 108 CCDS HistoryNCBI Gene:409Re-query CCDS DB by CCDS ID:82039.1Re-query CCDS DB by GeneID:409See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82039.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000571206.1 ENSP00000460607.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000571206.1Link to Ensembl Protein Viewer:ENSP00000460607.1Re-query CCDS DB by Nucleotide ID:ENST00000571206Re-query CCDS DB by Protein ID:ENSP00000460607
Original member Current member EBI ENST00000572457.5 ENSP00000465296.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000572457.5Link to Ensembl Protein Viewer:ENSP00000465296.1Re-query CCDS DB by Nucleotide ID:ENST00000572457Re-query CCDS DB by Protein ID:ENSP00000465296
Original member Current member EBI ENST00000574954.5 ENSP00000466344.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000574954.5Link to Ensembl Protein Viewer:ENSP00000466344.1Re-query CCDS DB by Nucleotide ID:ENST00000574954Re-query CCDS DB by Protein ID:ENSP00000466344
Original member Current member NCBI NM_001330064.2 NP_001316993.1 Accepted alive Link to Nucleotide Sequence:NM_001330064.2Link to Protein Sequence:NP_001316993.1Re-query CCDS DB by Nucleotide ID:NM_001330064Re-query CCDS DB by Protein ID:NP_001316993Link to BLAST:NP_001316993.1

Chromosomal Locations for CCDS 82039.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4717979 4718023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4718261 4718345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4718612 4718684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4719283 4719420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4720216 4720299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4720393 4720472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4720586 4720640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4720946 4721039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGTCTGACCGGTCCCTGCACCTCGAGGCTTCCCTGGACAAGGAGCTGTACTACCATGGGGAGCCCCTCA
AT
GTAAATGTCCACGTCACCAACAACTCCACCAAGACCGTCAAGAAGATCAAAGTCTCTGTGAGACAGTA
C
GCCGACATCTGCCTCTTCAGCACCGCCCAGTACAAGTGTCCTGTGGCTCAACTCGAACAAGATGACCAG
GTA
TCTCCCAGCTCCACATTCTGTAAGGTGTACACCATAACCCCACTGCTCAGCGACAACCGGGAGAAGC
GG
GGTCTCGCCCTGGATGGGAAACTCAAGCACGAGGACACCAACCTGGCTTCCAGCACCATCGTGAAGGA
G
GGTGCCAACAAGGAGGTGCTGGGAATCCTGGTGTCCTACAGGGTCAAGGTGAAGCTGGTGGTGTCTCGA
GGC
GGGGATGTCTCTGTGGAGCTGCCTTTTGTTCTTATGCACCCCAAGCCCCACGACCACATCCCCCTCC
CC
AGACCCCAGTCAGCCGCTCCGGAGACAGATGTCCCTGTGGACACCAACCTCATTGAATTTGATACCAA
C
TATGCCACAGATGATGACATTGTGTTTGAGGACTTTGCCCGGCTTCGGCTGAAGGGGATGAAGGATGAC
GAC
TATGATGATCAACTCTGCTAG


Translation (217 aa):
MSDRSLHLEASLDKELYYHGEPLNVNVHVTNNSTKTVKKIKVSVRQYADICLFSTAQYKCPVAQLEQDDQ
V
SPSSTFCKVYTITPLLSDNREKRGLALDGKLKHEDTNLASST
IVKEGANKEVLGILVSYRVKVKLVVSR
G
GDVSVELPFVLMHPKPHDHIPLPRPQSAAPETDVPVDTNLIEFDTNYATDDDIVFEDFARLRLKGMKDD
D
YDDQLC




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser