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Report for CCDS36876.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36876.1 Public Mus musculus 14 Mmrn2 23 108 98 CCDS HistoryNCBI Gene:105450Re-query CCDS DB by CCDS ID:36876.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36876.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000111908.2 ENSMUSP00000107539.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111908.2Link to Ensembl Protein Viewer:ENSMUSP00000107539.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000111908Re-query CCDS DB by Protein ID:ENSMUSP00000107539
Original member Current member NCBI NM_153127.3 NP_694767.3 Accepted alive Link to Nucleotide Sequence:NM_153127.3Link to Protein Sequence:NP_694767.3Re-query CCDS DB by Nucleotide ID:NM_153127Re-query CCDS DB by Protein ID:NP_694767Link to BLAST:NP_694767.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694767.3 943 A6H6E2-1 943 100% 0 0

Chromosomal Locations for CCDS 36876.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 34375615 34375778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34396165 34396293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34396372 34396478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34396559 34396639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34397547 34397720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34397830 34399623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34402913 34403295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2832 nt):
ATGATCCCGACACTGCTGCTGGGCTTTGGGGTGTACCTGAGCTGGGGACTGCTAGGGTCCTGGGCACAGG
ACCCCGGTACCAAGTTCTCCCATCTCAATAGGCCCGGCATGCCTGAAGGCTGGAGACTAGGGGCTGAGGA
TACCAGCAGAGACCCCATCAGACGGAACTGGTGTCCTTACCAGAAGTCCAGGCTAGTCACCTTTGTAGCT
GCTTGCAAAACAGAGAAATTCCTGGTCCATTCACAGCAGCCATGTCCACAGGGAGCCCCTGACTGCCAGG
GAGTCAGAGTCATGTATCGAGTGGCCCAGAAGCCAGTGTACCAGGTCCAGCAGAAGGTGCTGATCTCTGT
GGACTGGCGGTGCTGCCCAGGGTTCCAGGGACCAGACTGCCAGGACCACAATCCCACAGCAAACCCTGAG
CCCACAGAGCCAAGTGGTAAACTCCAGGAGACTTGGGACTCGATGGATGGCTTTGAACTTGGTCACCCTG
TCCCAGAGTTTAATGAGATTAAGGTGCCACAAGAACAACAGGAAAACCTGCTTCAAAATCTCCAGAATGA
TGCCCAGTCAGTAGAAGATGGCTTTCCAGGCTCTTGGGAAGCCCCACCCAGCAACCTCACAGATGAGATG
ACAGAAGCCAATCTAACAGAATTCGAGTTTCCTGGCAGGACATCAGAGCACCTGCTGCAGCCCCATATTG
ATGCATTCCTGAAAGCACACTTCAGTCCCATCTGGAAGAACTTCAACGACAGCTTGCACAGCCTCTCCCA
GGCCATCAGAAACTTGTCTCTTGATGTGGAGGCCAATCACCAGGCCATCAAGATGATCCAGGAGGGCACA
GTGGCTAGGGCTGACTTCCAAGAGCTTGGTGCCAAGTTTGAGGCCAAGGTCCAGCAGAATAGCCAGAGAC
TGGGCCAACTGTGGCAGGATGTGGAGGACCAGCTGCATGCCCAGCGCCGATCGGTGCATCATGCCCTCTC
TGATGTCCAGGCTGAGGTGAGCACCAAGTTAAAGCAGCTTGTCAAGGCTCAGGAACTTCCAGGGGCCAAT
GGCAGCCTGGTGATGGCATCTGCAGCAGCGGCAGCAAGGCCAGAGCCAGAGAGCCTGCAGGCCAGGCTAG
GGCAGCTGCAGAGAAACCTCTCTGCTCTGCACATGGTCACTAGCCAGAGGGAGGAGGAGTTGCAGAGCAC
CCTCAAGAACATGGACAGCGTCCTGAAGCAGCACGCCGAAGAGATCAAAGAGCTCTATTCTGAATCGGAT
GAGACCTTCGACCAGATCAGCAAGGTAGAGAGGCAGGTGGAGGAGCTGCTGGTGAACCACACCGGGCTTC
GAGAGCTGCGGGTGATCCTAATGGAAAAGTCCCTGATCATGGAGGAGAACAAAGAGGAGATAGAGCGGCA
ACTGTTGGAACTCAACCTTACCCTGCAGCATCTGCATGCGGGTCATGCAGACCTCATTAAGTATGTCAAG
GACTGCAACTGCCAAAGGGTCAACTCTGACGTGGATGTCGCTCCGGAGGGCCACAGGGATGTCATGCACA
CCCTAGAAGAGACCCAAGTGAGCCTGGACGAACAGCACCAGCTAGACGGTTCTTCTTTGCAGGCCCTGCA
AAGCACTGTAGATGCCATGTCTTCAGCAATGGATGCCTATAGAGGAGAGGGTGAACGGGCCCGGGCTGAA
AGGGCACGGATACGGAGCCAACTGCGGGCTCTGGATCATGCTGTGGAAGCGCTGAAGACAGCGGCGAATG
GAACCCGCAAAGAGATACGCCTACTGCACGGCTCCTTCACAGCCCTGCTGGAGGATGCCCTGCGACATCA
GGCCGTGCTAGCTGCACTCTTCGGGGAGGAGATGATAGACGAGATGTCAGAGGAGGCCCCTCGCCCTCTG
CCACTGGATTATGAGCAGATCCGCCTAGCCCTGCAGGACGCGGCCAGTGGGCTACAGGAACAGGCGATTG
GTTGGGAGGACTTGGCCACCCGGGTGGAGGCATTGGAGAAGGCCGCAGGTGGCTTTGTGGAGCAGCACCC
ACAGTTGGCAGAGGGACTTGAGCCCAGCCACGACTCTGGGAGAGAGGAGGAAGCCATGACTTTGGCGGAG
CTGGAGCAGGAGATTCGGCGCCTGAGTTCTGATGTCAAGCAGATTGGGCAGTGCTGTGAGGCCTCCTGGG
CTGCCTCCCTCAATAGCTCCCTTGAAGACCTACACAGCATGCTCTTGGACACCCAGCACGGCCTGAGACA
GCACCGGCAGCTCTTCCACAACCTCTTCCAGAACTTCCAAGGTCTGGTGGCAAGCAACATCAGCCTAGAC
TTGGGGAAGCTGCAGGCCATGTTGAGTAAGAAAGATAAGAAGCAACCGAGAGGCCCAGGAGAATCCCGGA
AGAGGGATAAGAAGCAAGTGGTGATGTCTACAGATGCACACGCCAAAGGTCTGGAGCTCTGGGAGACAGG
CTCCCCTGTGGCCTTCTATGCCGGTTCTTCAGAAGGGGCCACTGCTCTGCAGATGGTGAAGTTCAACACC
ACATCCATCAATGTGGGCAGCAGCTACTTTCCTGAACATGGCTACTTCCGAGCTCCCAAACGTGGCGTCT
ACTTGTTTGCTGTGAGCATTACATTTGGCCCAGGCCCAGGAATGGGGCAGCTGGTATTTGAAGGTCATCA
CCGGGTTCCAGTCTACAGTACGGAACAGAGGGGCGGGAGCACAGCCACCACTTTTGCTATGGTAGAGCTA
CAAAAGGGTGAGAGAGCGTGGTTTGAGTTAATCCAAGGGTCAGCAACCAAAGGGAGCCAACCAGGCACTG
CATTTGGGGGCTTCCTGATGTTCAAGACCTGA

Translation (943 aa):
MIPTLLLGFGVYLSWGLLGSWAQDPGTKFSHLNRPGMPEGWRLGAEDTSRDPIRRNWCPYQKSRLVTFVA
ACKTEKFLVHSQQPCPQGAPDCQGVRVMYRVAQKPVYQVQQKVLISVDWRCCPGFQGPDCQDHNPTANPE
PTEPSGKLQETWDSMDGFELGHPVPEFNEIKVPQEQQENLLQNLQNDAQSVEDGFPGSWEAPPSNLTDEM
TEANLTEFEFPGRTSEHLLQPHIDAFLKAHFSPIWKNFNDSLHSLSQAIRNLSLDVEANHQAIKMIQEGT
VARADFQELGAKFEAKVQQNSQRLGQLWQDVEDQLHAQRRSVHHALSDVQAEVSTKLKQLVKAQELPGAN
GSLVMASAAAAARPEPESLQARLGQLQRNLSALHMVTSQREEELQSTLKNMDSVLKQHAEEIKELYSESD
ETFDQISKVERQVEELLVNHTGLRELRVILMEKSLIMEENKEEIERQLLELNLTLQHLHAGHADLIKYVK
DCNCQRVNSDVDVAPEGHRDVMHTLEETQVSLDEQHQLDGSSLQALQSTVDAMSSAMDAYRGEGERARAE
RARIRSQLRALDHAVEALKTAANGTRKEIRLLHGSFTALLEDALRHQAVLAALFGEEMIDEMSEEAPRPL
PLDYEQIRLALQDAASGLQEQAIGWEDLATRVEALEKAAGGFVEQHPQLAEGLEPSHDSGREEEAMTLAE
LEQEIRRLSSDVKQIGQCCEASWAASLNSSLEDLHSMLLDTQHGLRQHRQLFHNLFQNFQGLVASNISLD
LGKLQAMLSKKDKKQPRGPGESRKRDKKQVVMSTDAHAKGLELWETGSPVAFYAGSSEGATALQMVKFNT
TSINVGSSYFPEHGYFRAPKRGVYLFAVSITFGPGPGMGQLVFEGHHRVPVYSTEQRGGSTATTFAMVEL
QKGERAWFELIQGSATKGSQPGTAFGGFLMFKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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