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Report for CCDS15291.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15291.1 Public Mus musculus 1 Ppp1r15b 23 108 98 CCDS HistoryNCBI Gene:108954Re-query CCDS DB by CCDS ID:15291.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15291.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052529.3 ENSMUSP00000057062.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052529.3Link to Ensembl Protein Viewer:ENSMUSP00000057062.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000052529Re-query CCDS DB by Protein ID:ENSMUSP00000057062
Original member Current member NCBI NM_133819.3 NP_598580.1 Accepted alive Link to Nucleotide Sequence:NM_133819.3Link to Protein Sequence:NP_598580.1Re-query CCDS DB by Nucleotide ID:NM_133819Re-query CCDS DB by Protein ID:NP_598580Link to BLAST:NP_598580.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598580.1 697 Q8BFW3-1 697 100% 0 0

Chromosomal Locations for CCDS 15291.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 133131747 133133615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 133136663 133136887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2094 nt):
ATGGAGACAGGAACGCACAGGGCCCGGAAGCGGCCTGGCCCTCGGCTGGGCTCCTGGTTCCGGCTGCCCT
TCCTTCGGCGATCGCACGCCTGCTCTTCGGAGTTCCCGCCGCCTTCCTCTCGACAAAATCCCGGGAACTC
CGCTCTGCCCGAGCGTCGGACCAGGTACTGGACCAAATTGCTTTCTCAGCTCCTTGCCCTGCTCCCTAGC
CTATTCCAGAAGCTGCTGCTTTGGAGCCAGCTTTTCGGGGGCCTGATTCCTACCAGATGGCTAGATTTTG
CCGCAAGTTACAGCGCCCTGAGAGCTTTGAGAGGACGGGAGGAATCTGCCGCTCCCACGGTGCAGAAGTC
TCTGAGTTCACTGCGGCTGGACTCTTCGGAAGACTTGGTTGTCAGTTCTCTTGATTGGCTAGAGGAGGGA
CTCCAGTGGCAGTGCTCGTCCTCAGACCTGGAGTTAAAACTCAAGGCCCAGGAAAGAGCTTTAGACTCTG
CAGCGCCCACTTTCCTCCTGGAGCAGCAGCTGTGGGGAGTGGAGTTGCTGCCCAGTAGCCTTCAAGCTGG
TCTAGTCTCCCACCGAGAACTTGACTCTTCATCCTCTGGGCCTCTGAGCGTTCAGAGCTTAGGTAATTTC
AAGGTAGTTTCCTATCTCCTGAACCCTTCCTACCTGGACTACCTTCCCCAGTTAGGGCTGCGCTGTCAGA
GCAGCGCTGGAGGTGGCCAGTTTGTGGGTTTCCGAACACTAACCCCAGAGAGCTGCTATCTTTCTGAAGA
TGGTTGTCACCCTCAGCCGTTGCGGGCAGAGATGTCGGCAACCGCCTGGAGAAGGTGTCCGCCTCTCTCT
ACAGAAGGCCTGCCGGAAATCCACCACCTTCGTATGAAACGGCTAGAATTCCTCCAGGCTAACAAAGGGC
AAGAGTTACCCACCCCTGACCAAGATAATGGCTATCATAGCCTGGAGGAGGAACATAACCTTCTCCGGAT
GGACCCACAACATTGCACAGATAACCCAGCACAGGCGGTGTCCCCTGCTGCAGACAGGCCGGAGCCCACT
GAGAAAAAACCAGAATTGGTGATTCAAGAAGTTTCACAGAGCCCCCAGGGAAGCAGTCTGTTTTGTGAAT
TACCCGTGGAAAAAGAATGTGAAGAGGACCACACTAATGCAACTGACCTCTCAGATAGAGGAGAGAGCCT
TCCTGTTTCTACCAGACCAGTTTGTAGCAACAAACTGATAGATTATATTTTGGGAGGCGCCCCCAGTGAC
TTGGAAGCCAGCTCTGATTCTGAAAGTGAGGATTGGGGCGAGGAACCTGAGGACGATGGCTTTGATAGCG
ATGGCTCCCTGTCTGAATCAGACGTGGAACAGGACTCGGAAGGCCTTCACCTTTGGAACTCTTTCCACAG
TGTAGATCCTTACAACCCCCAAAACTTTACAGCCACGATTCAGACGGCTGCCAGAATTGCCCCCAGAGAC
CCATCAGATTCAGGGACATCCTGGTCTGGCAGCTGTGGTGTAGGGAGCTGTCAGGAGGGACCCCTTCCGG
AGACCCCCGACCATAGTTCCGGGGAGGAAGATGACTGGGAACCGAGTGCAGATGAAGCAGAGAATCTTAA
ATTGTGGAACTCTTTCTGTCATTCTGAGGACCCCTACAACCTTTTAAATTTTAAGGCTCCTTTTCAACCG
TCAGGGAAGAATTGGAAAGGCCGTCAGGACTCAAAGGCCTCTTCTGAGGCTACAGTGGCCTTCTCTGGCC
ATCATACCTTACTTTCTTGTAAGGCCCAGCTGTTAGAGAGCCAAGAAGATAATTGTCCAGGCTGTGGGCT
GGGTGAGGCTCTTGCTGGAGAAAGATACACCCATATCAAGAGAAAAAAGGTAACCTTCCTGGAAGAAGTT
ACTGAGTATTATATAAGTGGTGATGAGGATCGCAAAGGACCATGGGAAGAATTTGCAAGGGATGGATGCA
GGTTCCAGAAACGAATTCAAGAAACAGAAGTTGCCATTGGCTACTGCTTGGCCTTTGAGCACAGAGAAAA
AATGTTTAATAGACTGAGGATCGAGTCAAAGGACTTACTGTTGTACAGCAATGTTAAGAAGTGA

Translation (697 aa):
METGTHRARKRPGPRLGSWFRLPFLRRSHACSSEFPPPSSRQNPGNSALPERRTRYWTKLLSQLLALLPS
LFQKLLLWSQLFGGLIPTRWLDFAASYSALRALRGREESAAPTVQKSLSSLRLDSSEDLVVSSLDWLEEG
LQWQCSSSDLELKLKAQERALDSAAPTFLLEQQLWGVELLPSSLQAGLVSHRELDSSSSGPLSVQSLGNF
KVVSYLLNPSYLDYLPQLGLRCQSSAGGGQFVGFRTLTPESCYLSEDGCHPQPLRAEMSATAWRRCPPLS
TEGLPEIHHLRMKRLEFLQANKGQELPTPDQDNGYHSLEEEHNLLRMDPQHCTDNPAQAVSPAADRPEPT
EKKPELVIQEVSQSPQGSSLFCELPVEKECEEDHTNATDLSDRGESLPVSTRPVCSNKLIDYILGGAPSD
LEASSDSESEDWGEEPEDDGFDSDGSLSESDVEQDSEGLHLWNSFHSVDPYNPQNFTATIQTAARIAPRD
PSDSGTSWSGSCGVGSCQEGPLPETPDHSSGEEDDWEPSADEAENLKLWNSFCHSEDPYNLLNFKAPFQP
SGKNWKGRQDSKASSEATVAFSGHHTLLSCKAQLLESQEDNCPGCGLGEALAGERYTHIKRKKVTFLEEV
TEYYISGDEDRKGPWEEFARDGCRFQKRIQETEVAIGYCLAFEHREKMFNRLRIESKDLLLYSNVKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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