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Report for CCDS27755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27755.1 Public Mus musculus 15 Acr 23 108 98 CCDS HistoryNCBI Gene:11434Re-query CCDS DB by CCDS ID:27755.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27755.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023295.2 ENSMUSP00000023295.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023295.2Link to Ensembl Protein Viewer:ENSMUSP00000023295.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000023295Re-query CCDS DB by Protein ID:ENSMUSP00000023295
Original member NCBI NM_013455.3 NP_038483.1 Updated not alive Link to Nucleotide Sequence:NM_013455.3Link to Protein Sequence:NP_038483.1Re-query CCDS DB by Nucleotide ID:NM_013455Re-query CCDS DB by Protein ID:NP_038483
Current member NCBI NM_013455.4 NP_038483.1 Accepted alive Link to Nucleotide Sequence:NM_013455.4Link to Protein Sequence:NP_038483.1Re-query CCDS DB by Nucleotide ID:NM_013455Re-query CCDS DB by Protein ID:NP_038483Link to BLAST:NP_038483.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038483.1 436 P23578 436 100% 0 0

Chromosomal Locations for CCDS 27755.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89568362 89568438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89569337 89569543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89569746 89570029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89573119 89573264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89573832 89574428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1311 nt):
ATGGTAGAGATGCTGCCAACTGTCGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCA
CGTGTGATGGTCCCTGTGGGTTACGATTCAGGCAGAACTCACAAGCAGGTACCCGGATTGTCAGTGGGCA
GAGTGCGCAGCTTGGGGCCTGGCCCTGGATGGTCAGCTTACAGATCTTCACGTCCCATAACAGCCGCAGG
TACCACGCCTGTGGAGGCAGCCTCCTGAACTCCCACTGGGTGCTCACAGCTGCCCACTGCTTCGATAACA
AAAAAAAAGTCTATGACTGGAGACTGGTTTTCGGAGCACAAGAAATCGAATATGGAAGAAACAAGCCAGT
GAAAGAGCCCCAGCAGGAGAGATATGTGCAGAAGATTGTCATCCATGAGAAATACAACGTAGTGACGGAG
GGAAATGACATTGCGCTCTTGAAGATCACTCCTCCTGTTACATGTGGGAACTTCATTGGACCCTGCTGTC
TACCTCATTTTAAGGCGGGTCCTCCCCAAATACCCCACACCTGCTACGTGACTGGGTGGGGATACATAAA
AGAGAAGGCCCCCAGGCCATCACCTGTCCTGATGGAAGCACGTGTGGACCTCATTGACCTCGACCTGTGT
AACTCAACCCAGTGGTACAATGGGCGTGTCACATCGACTAATGTGTGTGCAGGGTATCCTGAAGGCAAGA
TTGACACCTGCCAGGGGGACAGTGGTGGGCCTCTCATGTGCAGAGACAACGTCGACAGCCCCTTTGTGGT
CGTGGGGATCACGAGCTGGGGGGTAGGCTGTGCCCGTGCTAAGCGTCCCGGAGTCTACACAGCCACCTGG
GACTACCTGGACTGGATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCCACCCCTC
ATCCGCCGACTACCCGCCATCCGATGGTCTCTTTTCACCCTCCTTCTCTTCGCCCTCCTTGGTATTTCCA
ACACCTGCCTTCTCGACCGCTTTACCTGCGACCACTACGGCCTCTGCTCCATCGGCCGTCTTCGACCCAA
ACCTCCTCATCACTCATGCCCCTCCTCTCGCCCCCAACCCCAGCCCAGCCTGCATCCTTTACCATTGCTA
CACAACACATGAGGCACCGCACAACGCTGTCTTTTGCTCGGCGTCTCCAGCGCCTCATAGAGGCCCTGAA
GATGAGAACTTACCCTATGAAACATCCCTCCCAGTACAGTGGACCAAGGAACTACCACTACCGCTTCTCC
ACGTTTGAGCCCCTTTCCAACAAACCCAGCGAGCCCTTCCTCCATTCCTGA

Translation (436 aa):
MVEMLPTVAVLVLAVSVVAKDNTTCDGPCGLRFRQNSQAGTRIVSGQSAQLGAWPWMVSLQIFTSHNSRR
YHACGGSLLNSHWVLTAAHCFDNKKKVYDWRLVFGAQEIEYGRNKPVKEPQQERYVQKIVIHEKYNVVTE
GNDIALLKITPPVTCGNFIGPCCLPHFKAGPPQIPHTCYVTGWGYIKEKAPRPSPVLMEARVDLIDLDLC
NSTQWYNGRVTSTNVCAGYPEGKIDTCQGDSGGPLMCRDNVDSPFVVVGITSWGVGCARAKRPGVYTATW
DYLDWIASKIGPNALHLIQPATPHPPTTRHPMVSFHPPSLRPPWYFQHLPSRPLYLRPLRPLLHRPSSTQ
TSSSLMPLLSPPTPAQPASFTIATQHMRHRTTLSFARRLQRLIEALKMRTYPMKHPSQYSGPRNYHYRFS
TFEPLSNKPSEPFLHS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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