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Report for CCDS19.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19.2 Public Homo sapiens 1 ACAP3 24 110 108 CCDS HistoryNCBI Gene:116983Re-query CCDS DB by CCDS ID:19.2See the combined annotation on chromosome 1 in Sequence Viewer

Public Note for CCDS 19.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 19.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354700.10 ENSP00000346733.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354700.10Link to Ensembl Protein Viewer:ENSP00000346733.5Re-query CCDS DB by Nucleotide ID:ENST00000354700Re-query CCDS DB by Protein ID:ENSP00000346733
Original member Current member NCBI NM_030649.3 NP_085152.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030649.3Link to Protein Sequence:NP_085152.2Re-query CCDS DB by Nucleotide ID:NM_030649Re-query CCDS DB by Protein ID:NP_085152Link to BLAST:NP_085152.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_085152.2 834 Q96P50-3 834 100% 0 0

Chromosomal Locations for CCDS 19.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 1293564 1293708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1293823 1293933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1294090 1294199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1294402 1294628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1294718 1294816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1295447 1295554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1295736 1295938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1296015 1296109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1296211 1296280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1296425 1296633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1297822 1297933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1298013 1298113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1298370 1298421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1298567 1298679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1299345 1299356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1299831 1299905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1299973 1300068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1300158 1300202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1300509 1300692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1301988 1302046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1302922 1302975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1303162 1303281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1304086 1304143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1307769 1307815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2505 nt):
ATGACCGTGGAGTTCGAGGAGTGCGTCAAGGACTCCCCGCGCTTCAGGGCGACCATTGACGAGGTGGAGA
CGGACGTGGTGGAGATTGAGGCCAAACTGGACAAGCTGGTGAAGCTGTGCAGTGGCATGGTGGAAGCCGG
TAAGGCCTACGTCAGCACCAGCAGGCTTTTCGTGAGCGGCGTCCGCGACCTGTCCCAGCAGTGCCAGGGC
GACACCGTCATCTCGGAATGTCTGCAGAGGTTCGCTGACAGCCTACAGGAGGTGGTGAACTACCACATGA
TCCTGTTTGACCAGGCCCAGAGGTCCGTGCGGCAGCAGCTCCAGAGCTTTGTCAAAGAGGATGTGCGGAA
GTTCAAGGAGACAAAGAAGCAGTTTGACAAGGTGCGGGAGGACCTGGAGCTGTCCCTGGTGAGGAACGCC
CAGGCCCCGAGGCACCGGCCCCACGAGGTGGAGGAAGCCACCGGGGCCCTCACCCTCACCAGGAAGTGCT
TCCGCCACCTGGCACTGGACTATGTGCTCCAGATCAATGTTCTGCAGGCCAAGAAGAAGTTTGAGATCCT
GGACTCTATGCTGTCCTTCATGCACGCCCAGTCCAGCTTCTTCCAGCAGGGCTACAGCCTCCTGCACCAG
CTGGACCCCTACATGAAGAAGCTGGCAGCCGAGCTGGACCAGCTGGTGATCGACTCTGCGGTGGAAAAGC
GTGAGATGGAGCGAAAGCACGCCGCCATCCAGCAGCGGACGCTGCTGCAGGACTTCTCCTACGATGAGTC
CAAAGTGGAGTTTGACGTGGACGCGCCCAGTGGGGTGGTGATGGAGGGCTACCTCTTCAAGAGGGCCAGC
AACGCTTTCAAGACATGGAACCGGCGCTGGTTCTCCATTCAGAACAGCCAGCTGGTCTACCAGAAGAAGC
TCAAGGATGCCCTCACCGTGGTGGTGGATGACCTCCGCCTGTGCTCTGTGAAGCCGTGTGAGGACATCGA
GCGGAGGTTCTGCTTCGAGGTGCTGTCACCCACCAAGAGCTGCATGCTGCAGGCTGACTCCGAGAAGCTG
CGGCAAGCCTGGGTCCAGGCTGTGCAGGCCAGCATCGCCTCCGCCTACCGCGAGAGCCCTGACAGTTGCT
ATAGCGAGAGGCTGGACCGCACAGCATCCCCGTCCACGAGCAGCATCGACTCCGCCACCGACACTCGGGA
GCGTGGCGTGAAGGGCGAGAGTGTGCTGCAGCGTGTGCAGAGTGTGGCCGGCAACAGCCAGTGCGGCGAC
TGCGGCCAGCCGGACCCCCGCTGGGCCAGCATCAACCTGGGCGTGCTGCTCTGCATTGAGTGCTCCGGCA
TCCACAGGAGCCTGGGTGTCCACTGCTCCAAGGTGCGGTCCCTGACGCTGGACTCGTGGGAGCCTGAGCT
GCTAAAGCTGATGTGTGAGCTTGGAAACAGCGCTGTGAATCAGATCTATGAGGCCCAGTGTGAGGGTGCA
GGCAGCAGGAAACCCACAGCCAGCAGCTCCCGGCAGGACAAGGAGGCCTGGATCAAGGACAAATACGTGG
AAAAGAAGTTTCTGCGGAAGGCGCCCATGGCACCAGCCCTGGAGGCCCCAAGACGCTGGAGGGTGCAGAA
GTGCCTGCGGCCCCACAGCTCTCCCCGCGCTCCCACTGCCCGCCGCAAGGTCCGGCTTGAGCCCGTTCTG
CCCTGTGTGGCCGCTCTGTCCTCAGTGGGCACCCTGGATCGTAAGTTCCGCCGAGACTCCCTCTTCTGTC
CCGACGAGCTGGACTCGCTCTTCTCCTACTTCGACGCAGGGGCCGCAGGGGCTGGCCCTCGCAGTCTGAG
TAGCGACAGTGGCCTTGGGGGCAGCTCGGATGGCAGCTCGGACGTCCTGGCTTTCGGCTCGGGCTCTGTG
GTGGACAGCGTCACTGAGGAGGAGGGTGCAGAGTCGGAGGAGTCCAGCGGTGAGGCAGACGGGGACACTG
AGGCCGAGGCCTGGGGCCTGGCGGACGTGCGCGAGCTGCACCCGGGGCTCTTGGCGCACCGCGCAGCGCG
TGCCCGCGACCTTCCTGCGCTGGCGGCGGCGCTGGCCCACGGGGCCGAGGTCAACTGGGCGGACGCGGAG
GATGAGGGCAAGACGCCGCTGGTGCAGGCCGTGCTAGGGGGCTCCTTGATCGTCTGTGAGTTCCTGCTGC
AAAACGGAGCGGACGTGAACCAAAGAGACAGCCGGGGCCGGGCGCCCCTGCACCACGCCACGCTGCTGGG
CCGCACCGGCCAGGTTTGCCTGTTCCTGAAGCGGGGCGCGGACCAGCACGCCCTGGACCAAGAGCAGCGG
GACCCGTTGGCCATCGCAGTGCAGGCGGCCAACGCTGACATCGTGACACTGCTCCGTCTGGCGCGCATGG
CGGAGGAAATGCGCGAGGCCGAGGCTGCCCCTGGTCCCCCGGGCGCCCTGGCGGGCAGCCCCACGGAGCT
CCAGTTCCGCAGGTGTATCCAGGAGTTCATCAGCCTCCACCTGGAAGAGAGCTAG

Translation (834 aa):
MTVEFEECVKDSPRFRATIDEVETDVVEIEAKLDKLVKLCSGMVEAGKAYVSTSRLFVSGVRDLSQQCQG
DTVISECLQRFADSLQEVVNYHMILFDQAQRSVRQQLQSFVKEDVRKFKETKKQFDKVREDLELSLVRNA
QAPRHRPHEVEEATGALTLTRKCFRHLALDYVLQINVLQAKKKFEILDSMLSFMHAQSSFFQQGYSLLHQ
LDPYMKKLAAELDQLVIDSAVEKREMERKHAAIQQRTLLQDFSYDESKVEFDVDAPSGVVMEGYLFKRAS
NAFKTWNRRWFSIQNSQLVYQKKLKDALTVVVDDLRLCSVKPCEDIERRFCFEVLSPTKSCMLQADSEKL
RQAWVQAVQASIASAYRESPDSCYSERLDRTASPSTSSIDSATDTRERGVKGESVLQRVQSVAGNSQCGD
CGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSAVNQIYEAQCEGA
GSRKPTASSSRQDKEAWIKDKYVEKKFLRKAPMAPALEAPRRWRVQKCLRPHSSPRAPTARRKVRLEPVL
PCVAALSSVGTLDRKFRRDSLFCPDELDSLFSYFDAGAAGAGPRSLSSDSGLGGSSDGSSDVLAFGSGSV
VDSVTEEEGAESEESSGEADGDTEAEAWGLADVRELHPGLLAHRAARARDLPALAAALAHGAEVNWADAE
DEGKTPLVQAVLGGSLIVCEFLLQNGADVNQRDSRGRAPLHHATLLGRTGQVCLFLKRGADQHALDQEQR
DPLAIAVQAANADIVTLLRLARMAEEMREAEAAPGPPGALAGSPTELQFRRCIQEFISLHLEES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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