CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS40125.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
40125.1 |
Public |
Mus musculus |
7 |
Atp2a1 |
23 |
108 |
98 |
|
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 40125.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000032974.12 |
ENSMUSP00000032974.6 |
Accepted |
alive |
|
|
|
NCBI |
NM_007504.2 |
NP_031530.2 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_031530.2 |
994 |
Q8R429 |
994 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 40125.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2985 nt): ATGGAGGCCGCGCACTCCAAGTCCACAGAGGAATGTTTGTCCTATTTCGGGGTGAGCGAGACCACAGGCC TTACCCCAGACCAAGTTAAGCGACATCTGGAAAAATACGGCCCCAATGAGCTCCCTGCTGAGGAAGGCAA GTCTCTGTGGGAGTTGGTGGTAGAGCAGTTCGAAGACCTGCTTGTGCGGATTCTTCTCCTGGCTGCCTGC ATTTCCTTTGTGCTGGCCTGGTTTGAGGAAGGCGAAGAAACCGTCACTGCCTTTGTGGAACCTTTTGTCA TTCTCTTGATCCTCATTGCCAACGCCATTGTGGGGGTTTGGCAGGAACGGAATGCAGAGAACGCTATCGA AGCGCTGAAAGAATATGAACCCGAGATGGGAAAGGTCTATCGGGCTGACCGAAAGTCAGTGCAAAGGATC AAGGCTCGGGACATCGTTCCTGGGGACATCGTGGAGGTGGCCGTTGGGGACAAAGTCCCTGCAGACATCC GCATCCTCTCCATCAAATCCACCACCCTCCGGGTCGACCAGTCCATCCTGACAGGAGAGTCTGTGTCTGT CATCAAGCACACAGACCCTGTCCCTGACCCCCGAGCTGTCAACCAGGACAAGAAGAACATGCTCTTCTCA GGTACCAACATCGCAGCCGGCAAGGCTGTAGGCATCGTGGCCACCACTGGTGTGAGTACTGAGATTGGCA AGATCCGAGACCAGATGGCTGCCACCGAGCAGGACAAGACTCCACTGCAGCAGAAGCTTGACGAGTTTGG GGAGCAGCTGTCCAAGGTCATCTCTCTCATCTGTGTGGCTGTCTGGCTTATCAACATTGGCCACTTCAAC GATCCTGTCCATGGGGGCTCCTGGTTCCGGGGTGCCATTTACTACTTCAAGATTGCTGTGGCCTTGGCTG TGGCGGCCATCCCAGAAGGGCTTCCTGCTGTCATCACCACCTGCTTGGCTTTGGGTACCCGCCGGATGGC AAAGAAGAACGCCATCGTGAGGAGTCTGCCCTCTGTGGAGACCCTGGGCTGTACCTCTGTCATCTGTTCT GACAAAACAGGGACCCTCACCACCAACCAGATGTCAGTTTGCAAGATGTTCATCATTGACAAGGTGGATG GGGATGTCTGCTCACTGAACGAGTTCTCCATCACTGGCTCTACTTATGCTCCTGAGGGAGAGGTCTTGAA GAATGATAAGCCAGTCCGAGCAGGGCAGTATGATGGGCTGGTGGAGCTCGCTACCATCTGTGCCCTCTGC AATGATTCCTCCTTGGACTTTAATGAGACCAAAGGTGTCTATGAGAAGGTGGGCGAGGCCACGGAGACTG CTCTCACCACCTTGGTGGAGAAGATGAACGTATTCAACACGGAAGTGAGAAGCCTCTCTAAAGTGGAGCG GGCCAACGCCTGCAATTCGGTGATCCGCCAACTCATGAAGAAGGAATTCACCCTGGAATTTTCCCGAGAC AGGAAGTCTATGTCTGTCTACTGTTCACCAGCTAAGTCCTCACGGGCTGCCGTGGGCAACAAGATGTTTG TCAAGGGTGCCCCCGAGGGGGTCATCGACCGCTGTAACTATGTGCGTGTTGGCACGACCCGTGTGCCATT GACAGGCCCCGTGAAGGAGAAGATCATGTCTGTGATCAAGGAGTGGGGCACTGGTCGGGACACACTGCGG TGCCTGGCGCTGGCCACCCGCGACACGCCCCCCAAACGCGAGGAGATGGTTCTGGATGATTCAGCCAAGT TCATGGAGTATGAGATGGACCTGACGTTTGTTGGTGTTGTGGGCATGTTGGATCCACCCCGCAAGGAGGT CACAGGCTCTATCCAGCTGTGTCGTGATGCTGGGATCCGAGTGATCATGATCACTGGGGACAACAAGGGT ACAGCCATTGCCATCTGCCGACGAATTGGCATCTTTTCGGAGAATGAGGAAGTGACAGACCGTGCCTACA CTGGCCGTGAGTTTGACGATCTGCCCCTGGCCGAGCAGCGGGAGGCCTGCAGACGCGCCTGCTGCTTTGC TCGTGTGGAGCCCTCACACAAGTCCAAGATTGTGGAGTACCTGCAGTCCTACGATGAGATCACAGCCATG ACAGGGGATGGTGTCAATGATGCCCCTGCTCTGAAGAAGGCCGAGATTGGCATTGCCATGGGATCTGGTA CTGCTGTGGCTAAGACGGCCTCTGAAATGGTACTGGCCGATGATAACTTCTCCACCATCGTGGCTGCCGT GGAGGAAGGCCGCGCCATCTACAACAACATGAAGCAGTTCATCCGCTACCTCATCTCCTCCAATGTGGGC GAGGTGGTCTGTATCTTCTTGACAGCAGCCTTGGGGCTGCCTGAGGCTCTGATCCCTGTGCAGCTGCTCT GGGTGAACTTGGTGACTGATGGGCTCCCGGCTACTGCCCTGGGATTCAACCCACCTGACCTGGACATCAT GGACCGCCCCCCCAGGAGTCCCAAGGAGCCTCTTATCAGTGGCTGGCTCTTTTTCCGCTACATGGCAATT GGGGGCTATGTGGGTGCAGCCACTGTAGGAGCAGCTGCCTGGTGGTTTTTGTATGCAGAGGACGGGCCTC ATGTCAGCTACCATCAGCTGACTCATTTCATGCAGTGCACTGAGCACAACCCTGAATTCGATGGCCTGGA CTGTGAGGTCTTTGAGGCCCCCGAGCCCATGACCATGGCCTTGTCTGTGTTGGTGACCATCGAGATGTGC AATGCTCTCAACAGCCTGTCTGAGAACCAGTCCCTACTGCGGATGCCACCCTGGGTGAACATCTGGCTGC TGGGTTCCATCTGCCTGTCCATGTCCCTCCACTTCCTCATCCTCTATGTCGACCCCCTGCCGATGATCTT CAAGCTCCGGGCCCTGGACTTTACCCAGTGGCTCATGGTCCTCAAGATCTCACTGCCAGTCATCGGGCTG GATGAGCTTCTCAAGTTCATTGCTCGGAACTATCTGGAGGGATAA
Translation (994 aa): MEAAHSKSTEECLSYFGVSETTGLTPDQVKRHLEKYGPNELPAEEGKSLWELVVEQFEDLLVRILLLAAC ISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRI KARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNMLFS GTNIAAGKAVGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN DPVHGGSWFRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICS DKTGTLTTNQMSVCKMFIIDKVDGDVCSLNEFSITGSTYAPEGEVLKNDKPVRAGQYDGLVELATICALC NDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRSLSKVERANACNSVIRQLMKKEFTLEFSRD RKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPLTGPVKEKIMSVIKEWGTGRDTLR CLALATRDTPPKREEMVLDDSAKFMEYEMDLTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKG TAIAICRRIGIFSENEEVTDRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAM TGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG EVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAI GGYVGAATVGAAAWWFLYAEDGPHVSYHQLTHFMQCTEHNPEFDGLDCEVFEAPEPMTMALSVLVTIEMC NALNSLSENQSLLRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLRALDFTQWLMVLKISLPVIGL DELLKFIARNYLEG
|