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Report for CCDS10394.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
10394.1 |
Public |
Homo sapiens |
15 |
TARS3 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:123283](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:10394.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 15 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 10394.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000335968.8 |
ENSP00000338093.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000335968.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000338093.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000335968](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000338093](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_152334.3 |
NP_689547.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_152334.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_689547.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_152334](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_689547](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_689547.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_689547.2 |
802 |
A2RTX5-1 |
802 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 10394.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2409 nt): ATGGCGGCCGAGGCCCTGGCGGCGGAGGCCGTGGCGTCGCGCCTGGAGCGGCAGGAGGAGGACATCCGCT GGCTGTGGTCGGAGGTCGAGCGCCTGAGGGACGAGCAGCTGAACGCGCCCTACAGCTGCCAGGCGGAGGG GCCGTGCCTCACGCGGGAGGTGGCGCAGCTCCGGGCCGAGAACTGCGACCTGCGCCACCGCCTGTGCAGC CTGCGGCTGTGCCTCGCCGAGGAGCGGAGCCGCCAGGCCACGCTGGAGAGCGCGGAGCTAGAGGCGGCGC AGGAGGCCGGCGCACAGCCTCCTCCTAGTCAAAGCCAAGACAAGGACATGAAAAAGAAGAAAATGAAGGA AAGCGAGGCTGACAGCGAGGTGAAGCATCAACCAATTTTCATAAAAGAAAGATTGAAGCTTTTTGAAATA CTGAAGAAAGACCATCAGCTCTTACTTGCCATTTATGGAAAAAAGGGGGATACAAGCAACATCATCACAG TAAGAGTGGCTGATGGGCAAACAGTGCAAGGGGAAGTCTGGAAAACAACGCCTTACCAAGTGGCTGCTGA AATTAGTCAGGAACTGGCTGAAAGCACGGTAATAGCCAAAGTCAATGGTGAACTGTGGGACCTGGACCGC CCATTGGAAGGGGACTCTTCTCTAGAGCTGCTTACATTTGATAATGAGGAAGCTCAAGCTGTGTACTGGC ACTCCAGTGCTCACATTCTTGGGGAGGCCATGGAGCTTTACTATGGAGGCCACCTGTGCTACGGTCCGCC CATTGAAAATGGATTTTATTATGACATGTTCATTGAAGACAGAGCAGTGTCCAGCACAGAATTGTCAGCC CTGGAGAATATATGTAAAGCCATCATAAAAGAAAAGCAACCTTTTGAAAGACTAGAAGTCAGCAAGGAAA TCCTCCTGGAAATGTTTAAGTACAATAAATTTAAATGCCGCATTCTGAATGAGAAAGTTAACACTGCAAC TACCACCGTGTACAGGTGCGGTCCATTAATTGACCTTTGCAAAGGTCCACATGTAAGACACACTGGAAAA ATTAAAACCATCAAAATTTTTAAGAATTCCTCAACATATTGGGAGGGCAATCCGGAAATGGAAACATTGC AGAGGATCTATGGAATATCCTTTCCTGATAACAAGATGATGAGAGACTGGGAAAAGTTCCAAGAGGAAGC AAAGAACCGAGATCACAGGAAGATCGGGAAGGAACAAGAACTTTTCTTTTTCCACGATTTGAGTCCTGGA AGCTGTTTTTTCCTTCCCAGAGGAGCCTTCATTTATAATACGCTTACAGATTTCATACGAGAGGAATATC ACAAACGGGACTTCACGGAGGTGCTCTCTCCCAATATGTACAACAGTAAACTCTGGGAAGCCTCAGGCCA CTGGCAGCATTACAGCGAGAACATGTTTACCTTTGAGATTGAAAAGGACACTTTTGCCCTCAAACCCATG AATTGTCCAGGGCACTGTCTAATGTTTGCCCATCGTCCACGATCTTGGAGGGAAATGCCTATTAGATTTG CTGATTTTGGAGTTCTGCATAGAAATGAACTGTCGGGGACTCTCAGCGGCTTGACCAGAGTGAGGCGCTT CCAGCAGGACGATGCTCACATTTTTTGCACAGTGGAGCAGATTGAAGAAGAAATAAAGGGGTGTTTGCAG TTTTTGCAATCTGTTTACTCAACATTTGGCTTCTCCTTTCAATTAAACCTGTCAACAAGGCCGGAAAACT TCCTAGGAGAGATTGAGATGTGGAATGAGGCTGAGAAGCAACTGCAGAACAGCTTGATGGACTTTGGAGA ACCGTGGAAAATGAACCCAGGAGATGGAGCATTTTATGGCCCTAAAATTGACATAAAAATCAAGGATGCT ATTGGCAGATACCATCAATGTGCTACAATTCAGCTGGACTTCCAACTGCCTATTAGATTTAATCTCACAT ATGTTAGTAAGGATGGGGATGATAAGAAGAGACCTGTGATCATTCATCGAGCCATTTTGGGATCAGTGGA AAGAATGATAGCCATTCTTTCAGAAAACTATGGCGGAAAATGGCCTTTCTGGCTATCTCCTCGTCAGGTG ATGGTCATCCCTGTGGGGCCAACTTGTGAAAAATATGCACTTCAGGTATCCAGTGAATTTTTTGAAGAAG GATTTATGGCTGACGTTGACTTGGATCACAGTTGTACACTAAATAAGAAAATACGAAATGCACAGCTGGC TCAGTATAATTTTATTTTGGTGGTTGGAGAAAAGGAAAAGATAGATAATGCTGTAAACGTGCGAACAAGA GACAACAAAATTCATGGAGAGATTTTAGTAACTTCTGCCATTGATAAACTGAAGAATCTCAGGAAGACAC GGACACTCAATGCTGAGGAGGCCTTTTGA
Translation (802 aa): MAAEALAAEAVASRLERQEEDIRWLWSEVERLRDEQLNAPYSCQAEGPCLTREVAQLRAENCDLRHRLCS LRLCLAEERSRQATLESAELEAAQEAGAQPPPSQSQDKDMKKKKMKESEADSEVKHQPIFIKERLKLFEI LKKDHQLLLAIYGKKGDTSNIITVRVADGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDR PLEGDSSLELLTFDNEEAQAVYWHSSAHILGEAMELYYGGHLCYGPPIENGFYYDMFIEDRAVSSTELSA LENICKAIIKEKQPFERLEVSKEILLEMFKYNKFKCRILNEKVNTATTTVYRCGPLIDLCKGPHVRHTGK IKTIKIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPG SCFFLPRGAFIYNTLTDFIREEYHKRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDTFALKPM NCPGHCLMFAHRPRSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQ FLQSVYSTFGFSFQLNLSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWKMNPGDGAFYGPKIDIKIKDA IGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQV MVIPVGPTCEKYALQVSSEFFEEGFMADVDLDHSCTLNKKIRNAQLAQYNFILVVGEKEKIDNAVNVRTR DNKIHGEILVTSAIDKLKNLRKTRTLNAEEAF
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