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Report for CCDS39795.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39795.1 Public Mus musculus 7 Gipr 23 108 98 CCDS HistoryNCBI Gene:381853Re-query CCDS DB by CCDS ID:39795.1Re-query CCDS DB by GeneID:381853See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 39795.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094790.4 ENSMUSP00000092384.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094790.4Link to Ensembl Protein Viewer:ENSMUSP00000092384.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000094790Re-query CCDS DB by Protein ID:ENSMUSP00000092384
Original member Current member NCBI NM_001080815.1 NP_001074284.1 Accepted alive Link to Nucleotide Sequence:NM_001080815.1Link to Protein Sequence:NP_001074284.1Re-query CCDS DB by Nucleotide ID:NM_001080815Re-query CCDS DB by Protein ID:NP_001074284Link to BLAST:NP_001074284.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074284.1 460 Q0P543-1 460 100% 0 0

Chromosomal Locations for CCDS 39795.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 19157368 19157568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19157646 19157687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19159515 19159653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19159746 19159834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19159961 19160030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19160331 19160391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19160595 19160754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19162549 19162693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19162868 19162971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19163510 19163613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19164038 19164145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19164520 19164622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19164968 19165024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1383 nt):
ATGCCCCTGCGGTTGCTGCTTCTGCTGCTGTGGTTGTGGGGACTCCAGTGGGCGGAGACAGACTCTGAGG
GGCAGACCACCACGGGGGAGCTGTACCAGCGCTGGGAGCACTACGGCCAGGAGTGCCAAAAGATGTTGGA
GACCACAGAACCTCCCTCAGGCCTGGCCTGTAACGGTTCCTTCGATATGTATGCCTGCTGGAACTACACG
GCCGCCAACACCACTGCTCGGGTGTCTTGCCCCTGGTATCTGCCCTGGTTCCGTCAGGTGTCTGCAGGCT
TTGTCTTCCGCCAGTGTGGCAGTGATGGCCAGTGGGGATCTTGGAGAGACCACACTCAGTGTGAGAATCC
AGAGAAGAATGGGGCTTTTCAGGACCAGACGCTGATCCTGGAGCGCCTGCAGATCATGTATACCGTGGGC
TACTCCCTGTCCCTGACGACTCTGCTGCTAGCCCTACTCATCTTAAGTTTGTTCAGGCGGCTGCACTGCA
CTCGTAATTACATTCACATGAACCTGTTCACGTCTTTCATGCTGCGGGCAGCAGCCATCCTCACCCGAGA
TCAGCTGCTGCCTCCACTGGGTCCCTACACTGGAGACCAGGCCCCTACCCCGTGGAACCAGGCCCTAGCT
GCCTGCCGCACGGCCCAGATCATGACCCAATATTGTGTGGGAGCCAATTACACCTGGCTACTGGTGGAGG
GTGTTTATCTGCACCATCTGCTGGTGATCGTGGGACGCTCAGAAAAGGGCCACTTCCGCTGCTACCTGCT
TCTTGGCTGGGGGGCCCCCGCGCTTTTCGTCATTCCCTGGGTGATCGTCAGGTACCTGCGCGAGAACACA
CAGTGCTGGGAGCGCAACGAAGTCAAAGCCATTTGGTGGATCATTCGCACTCCCATCCTAATAACCATCT
TGATCAATTTCCTCATCTTCATCCGCATCCTTGGCATCCTTGTTTCAAAGCTGAGGACACGGCAGATGCG
CTGCCCCGACTACCGACTAAGGCTGGCTCGCTCCACGCTGACACTGGTGCCCCTGCTGGGTGTCCACGAG
GTGGTGTTTGCGCCTGTGACGGAGGAACAGGTTGAAGGCTCCCTGCGCTTCGCCAAACTGGCCTTTGAAA
TCTTCCTAAGTTCCTTCCAGGGTTTCCTGGTGAGCGTGCTCTACTGCTTCATCAACAAAGAGGTGCAGTC
GGAGATCCGCCAGGGTTGGCGCCACCGCCGCCTGCGTCTCAGTCTTCAAGAGCAGCGTCCACGTCCGCAC
CAGGAACTCGCCCCCCGGGCTGTGCCTTTGAGCTCTGCGTGCCGAGAAGCTGCCGTTGGCAACGCCTTGC
CCTCTGGGATGCTGCATGTGCCTGGGGATGAGGTCTTGGAAAGTTACTGCTAG

Translation (460 aa):
MPLRLLLLLLWLWGLQWAETDSEGQTTTGELYQRWEHYGQECQKMLETTEPPSGLACNGSFDMYACWNYT
AANTTARVSCPWYLPWFRQVSAGFVFRQCGSDGQWGSWRDHTQCENPEKNGAFQDQTLILERLQIMYTVG
YSLSLTTLLLALLILSLFRRLHCTRNYIHMNLFTSFMLRAAAILTRDQLLPPLGPYTGDQAPTPWNQALA
ACRTAQIMTQYCVGANYTWLLVEGVYLHHLLVIVGRSEKGHFRCYLLLGWGAPALFVIPWVIVRYLRENT
QCWERNEVKAIWWIIRTPILITILINFLIFIRILGILVSKLRTRQMRCPDYRLRLARSTLTLVPLLGVHE
VVFAPVTEEQVEGSLRFAKLAFEIFLSSFQGFLVSVLYCFINKEVQSEIRQGWRHRRLRLSLQEQRPRPH
QELAPRAVPLSSACREAAVGNALPSGMLHVPGDEVLESYC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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