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Report for CCDS32690.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32690.1 Public Homo sapiens 17 HSF5 24 110 108 CCDS HistoryNCBI Gene:124535Re-query CCDS DB by CCDS ID:32690.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32690.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323777.8 ENSP00000313243.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000323777.8Link to Ensembl Protein Viewer:ENSP00000313243.3Re-query CCDS DB by Nucleotide ID:ENST00000323777Re-query CCDS DB by Protein ID:ENSP00000313243
Original member Current member NCBI NM_001080439.3 NP_001073908.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080439.3Link to Protein Sequence:NP_001073908.2Re-query CCDS DB by Nucleotide ID:NM_001080439Re-query CCDS DB by Protein ID:NP_001073908Link to BLAST:NP_001073908.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073908.2 596 Q4G112-1 596 100% 0 0

Chromosomal Locations for CCDS 32690.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 58422360 58422430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58458768 58458945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58462782 58463303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58466885 58466979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58479893 58480267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58487725 58488274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1791 nt):
ATGGAGGCGCTGCTCTCCACCCCCATCAACCCCAACAACTTCCCCGCCAAGCTGTGGCGCCTGGTGAACA
GCCCGCGCTACCGCTCCATCCGCTGGGACGGCCGCGGCGAGGGGCTGCTTATCGATCAGCCGCTCTTCGA
GGCCGAGCTGCTCAGCCCGCCCGGGCCGGGGGGCGGTGGCGGGACTGCGGGGGCCGGGGCCGAGCCCGAG
CTCTTCAAAACCACCAGCTTCACCAGCTTCATCCGCCAGCTCAACCTCTACGGCTTCCGCAAGGTGGTGC
TGGGCGGGCCGGGGGGCGGCAAACCGGCAGGCAATGGGCCGCTCCATCACTTCCACAACCCGCACTTCCG
CCGCGACCAGCCACAGCTGCTCGTGCACCTCAAGCGCCTCACCAGCGCCAACAAGGCCAAGCTGGCGGCC
GGCCTGGAGGTGCCCTGCCGCCCGCCCAACCGCTTCCAGCGGCTGCTCATCACCTCGGCCTCCGCCGCCA
CCGCGCCACTGCAGCACCAGCAGCCGCCGCCGCCCGCGGGGCCCCGGCCCGAGCCGCACGGACCAGTGGC
TGTAGGACAATTTCACCGGTCATTTCGTCGAGATAGTTTGTCTCCTTACTCCTGTGTATCAACTCCATCC
CACGACCACAGTACTTACCCTCTGAAAGGTTTAGATCGGACCCCAGTTCCTCATAGAATATGGCAGAACT
CCCTTGGAATGCATCCTGGACAAGTGGAGACATCTCCCACATTTTCAGATAAAGGGGTTCCGTTTCCTGT
ACTCCAGAGGTTTCCAACTGAGGTTACCTATACACTGCAGCCCAGCACCACATCTGTACATGTTCAACAA
GGTCCTCAAACAATGGTCAGCTCCTCCCAAAAATACAGTAACTACACACCCTCAGCACAGTACTCGCAAG
CCTACTATCCAACAGCTGTGCTACAGTGCTGTTCTCCTACCCACATGGATGCTCTAAGTAGTTGTGTCAC
TCCCACTGCCTCTTCCTATGCACACTGCAACTACTTCCAGAATCCTTCAATGCAGTCCTCCTATCCAGTT
GAATTTTTGCCTTCCAATTGGCCCTGCAGTACTACTGATGAAAATACAAAGACAGAAGTAAACCTAGAGG
CTGTCTTTCAGATAGTTGATGAGTTGCATTCCTCCCCTAAATTGGAGATGGTAAAGGTGGAGCCTGTTGA
GAATCAGTGCCCAACATCTCCGTCTTACAGAGGCCAACACATTTTAGCTAATTCTAACAACAGCAATCCA
TGTTCTGCAAGTCAGGCTAGCCAGCTGGAGCCACTTACTCCTGTAGGCTCAGATATTATGTCTTTTGTGG
TTGGAACAGAACAAGCAGTTGCCTGCTCTCTACCACAGTCACCTGAGTACATCTATACCATCCACACAGC
TCAGCCTGTTGAAAATAGCACAATACAGGAATCTGCAGCCATCCAGCAAGCTCATGTCAAACTGAAGGAG
CACCTAAATCATAATCCATCTCCATCTTCAGTAGTATTTGTGCAGGAAGGGCCACCATTCAGCACACACC
AGGTGGATGCCAACATAAAATGCCAGACCAGTTCACGTGAGAATATCTTGCCGTCAGAACAGATGGGATT
CCTCATTTCAGAAATGGGGCCTGCTAGCAAGCCTAGTGAAGACACAGGTTTAGCCACTCCAGCCAGATAC
AGAGAGCACAGAAGCAACTCACAACAAGGAAAGTCCCCTGATCTTCATCTGCTGGTGGACGTGGCCTGCA
AGCAGGAGCGCTTTCCAAAGGAGGAAGAATTAAAAGAGTGA

Translation (596 aa):
MEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGGGTAGAGAEPE
LFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQPQLLVHLKRLTSANKAKLAA
GLEVPCRPPNRFQRLLITSASAATAPLQHQQPPPPAGPRPEPHGPVAVGQFHRSFRRDSLSPYSCVSTPS
HDHSTYPLKGLDRTPVPHRIWQNSLGMHPGQVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVHVQQ
GPQTMVSSSQKYSNYTPSAQYSQAYYPTAVLQCCSPTHMDALSSCVTPTASSYAHCNYFQNPSMQSSYPV
EFLPSNWPCSTTDENTKTEVNLEAVFQIVDELHSSPKLEMVKVEPVENQCPTSPSYRGQHILANSNNSNP
CSASQASQLEPLTPVGSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAAIQQAHVKLKE
HLNHNPSPSSVVFVQEGPPFSTHQVDANIKCQTSSRENILPSEQMGFLISEMGPASKPSEDTGLATPARY
REHRSNSQQGKSPDLHLLVDVACKQERFPKEEELKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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