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Report for CCDS30221.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30221.1 Public Mus musculus X Tktl1 23 108 98 CCDS HistoryNCBI Gene:83553Re-query CCDS DB by CCDS ID:30221.1Re-query CCDS DB by GeneID:83553See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30221.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000010127.11 ENSMUSP00000010127.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000010127.11Link to Ensembl Protein Viewer:ENSMUSP00000010127.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000010127Re-query CCDS DB by Protein ID:ENSMUSP00000010127
Original member Current member NCBI NM_031379.2 NP_113556.2 Accepted alive Link to Nucleotide Sequence:NM_031379.2Link to Protein Sequence:NP_113556.2Re-query CCDS DB by Nucleotide ID:NM_031379Re-query CCDS DB by Protein ID:NP_113556Link to BLAST:NP_113556.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_113556.2 595 Q99MX0 595 100% 0 0

Chromosomal Locations for CCDS 30221.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 74177290 74177423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74181784 74181898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74191222 74191319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74193519 74193710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74193794 74193921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74196984 74197177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74197640 74197804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74200598 74200754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74202531 74202661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74204874 74204957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74205874 74205970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74206345 74206464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74207674 74207846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1788 nt):
ATGTCGGAAGCTGAGGCAAGCAGTGGGATGGCCCACAACGCTGGACCTGATGAGAAGACATTGCAGGTGT
TGCGGGACATGGCCAACCGCCTGCGAATCCGTTCCATCAAGGCCACAAATTCCTCGACCACTAGCTATCT
CATACCATGCAGCAATGCTGAGATCATGTCTGTGCTGTTCTTTTATACAATGAGATATAAACAAGAAGAC
CCTGAAAACCCAGACAATGACCGGTGCATCCTTTCAAAGGGACTACCATTTGTTAATGTGGCAACAGGAT
GGCCTGGACAAGGACTAGGGGCTGCCTGTGGGATGGCATATACTGGCAAGTACTTTGACCAAGCCAGCTA
CCGGGTGTTCTGTCTTCTGGGGGATGAGGAATCCACAGAAGGCTCTGTTTGGGAGGCATTTGCCTTTGCA
TCCTACTACAATTTGGACAATCTTATGGCAATCTTTGATGTGAACCGCATTGGACACAGTAGCTCCATGT
CTGTTGAGCACTGCATTGCCATCTACCAGAAGCGTTGTGAAGCCTTTGGGTGGAATACTTACGTGGTGGA
TGGCCGTGATGTCAAGACCCTGTGCCATGTATTCTCACAGGCAGCTCAAGTGAGAGGCAAGCCCACTGCT
GTGGTTGCCAAAACCTTCAAGGCCCGAGGCATGCCAAATGTTGAGGATGCGGAAAGTTGGTATGGAAGGC
CAATGCCAAAAGAAAGAGCAGATGCAATTGTCAAGTTAATTGAGAGCCAGATACAGACCAACAAAATTCT
TGTACCATCACCCCCTATTGAGGACTCGCCTCAAATTAACATCATGAATATATGTATGACTTCGCCCCCT
GTTTACGTAGCTGATGACAAGGTGTCTACTCAAAGAGCATGTGGTTTGGCTCTAGCTAAACTGGGCCATG
AAAATGACAGAGTTATTGTGCTGGGTAGTGACACCAAGAACTGCAATTTTTCTGACATATTCAAGAAAGA
ACACCCAGAGAGATTCATCCAGTGTTGTATTGCTGAACAAAACATGGTAAATGTGGCTCTAGGATGCTCC
ACCCGTGACCGGACCATTGTTTTTGCTTACTCCTTCGCTGCCTTTTTCACCCGAGCATTTGATCAGATCC
GATTGGGAGCCATCTCTCAAATCAACATCAACCTTATTGGTTGTCACTGCGGGGTATCTACTGGTGATGA
CAACCCTTACCATATGGCCCTGGAAGACCTGGCCATGTTCCGAGCAATTCCCAATTGTGTTGTTTTCTAT
CCAAGTGATGCCGTCTCCACAGAACATGCTGTTTACTTAGCAGCCAATACTAAGGAAATGTGCTTTATTC
GTACCAGCCAAGCAGAAACTGCAATTATTTACACCACTCAAGAAACCTTTCAGATTGGACAGGCCAAGGT
TGTCCGCCATAGTGACAATGACAAGGTCATAGTTATTGGAGCAGGAGTCACCCTGCATGAAGCCCTAGTA
GCTGCTGCTGAGCTCTCTAAAGAAGATATATCTATCCGTGTCATTGACTTGTTTACCATTAAACCTCTGG
ACATTGCCACCATCATTTCCAATGCAAAAGCCACAGGTGGCCGAATTATCACCGTGGAGGATCACTATCC
TGAAGGTGGCATTGGAGGAGCTGTCTGTGCAGCAGTCTCCATGGAGCCTAACATTGTGGTTCATAACCTG
GCAGTAATGGATGTGCCTCGTAGTGGAAGATGCAATGAAGCACTAGATTTTTCTGGAATCAGTTCCAGAC
ACATCATTGTGGCTGTGAAATGCATCTTAATGACCTAA

Translation (595 aa):
MSEAEASSGMAHNAGPDEKTLQVLRDMANRLRIRSIKATNSSTTSYLIPCSNAEIMSVLFFYTMRYKQED
PENPDNDRCILSKGLPFVNVATGWPGQGLGAACGMAYTGKYFDQASYRVFCLLGDEESTEGSVWEAFAFA
SYYNLDNLMAIFDVNRIGHSSSMSVEHCIAIYQKRCEAFGWNTYVVDGRDVKTLCHVFSQAAQVRGKPTA
VVAKTFKARGMPNVEDAESWYGRPMPKERADAIVKLIESQIQTNKILVPSPPIEDSPQINIMNICMTSPP
VYVADDKVSTQRACGLALAKLGHENDRVIVLGSDTKNCNFSDIFKKEHPERFIQCCIAEQNMVNVALGCS
TRDRTIVFAYSFAAFFTRAFDQIRLGAISQININLIGCHCGVSTGDDNPYHMALEDLAMFRAIPNCVVFY
PSDAVSTEHAVYLAANTKEMCFIRTSQAETAIIYTTQETFQIGQAKVVRHSDNDKVIVIGAGVTLHEALV
AAAELSKEDISIRVIDLFTIKPLDIATIISNAKATGGRIITVEDHYPEGGIGGAVCAAVSMEPNIVVHNL
AVMDVPRSGRCNEALDFSGISSRHIIVAVKCILMT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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