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Report for CCDS88709.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88709.1 Public Mus musculus 14 Fgf17 23 108 98 CCDS HistoryNCBI Gene:14171Re-query CCDS DB by CCDS ID:88709.1Re-query CCDS DB by GeneID:14171See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88709.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000227123.1 ENSMUSP00000154684.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000227123.1Link to Ensembl Protein Viewer:ENSMUSP00000154684.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000227123Re-query CCDS DB by Protein ID:ENSMUSP00000154684
Original member NCBI NM_001360108.1 NP_001347037.1 Updated not alive Link to Nucleotide Sequence:NM_001360108.1Link to Protein Sequence:NP_001347037.1Re-query CCDS DB by Nucleotide ID:NM_001360108Re-query CCDS DB by Protein ID:NP_001347037
Current member NCBI NM_001360108.2 NP_001347037.1 Accepted alive Link to Nucleotide Sequence:NM_001360108.2Link to Protein Sequence:NP_001347037.1Re-query CCDS DB by Nucleotide ID:NM_001360108Re-query CCDS DB by Protein ID:NP_001347037Link to BLAST:NP_001347037.1

Chromosomal Locations for CCDS 88709.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 70636730 70637023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70638467 70638573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70638802 70638946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70641532 70641568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70641723 70641757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (618 nt):
ATGGGAGCCGCCCGCCTGCTGCCTAACCTTACCCTGTGCTTGCAGCTATTGATTCTCTGCTGTCAAACAC
AGTACGTGAGGGACCAGGGCGCTATGACCGACCAGCTGAGCAGGCGGCAAATCCGTGAATACCAGCTCTA
CAGCCGGACCAGTGGCAAGCACGTGCAGGTCACCGGACGTCGCATCTCTGCCACCGCAGAGGATGGCAAC
AAGTTCGCCAAGCTCATCGTGGAGACAGATACATTCGGCAGCAGAGTCCGCATCAAGGGGGCAGAGAGCG
AGAAGTACATCTGTATGAACAAGAGGGGCAAGCTGATTGGGAAGCCGAGCGGGAAGAGCAAAGACTGCGT
GTTCACCGAGATCGTACTGGAGAACAACTACACGGCCTTCCAGAACGCCCGGCACGAGGGCTGGTTCATG
GCTTTCACTCGGCAGGGCCGGCCACGCCAGGCCTCCCGGAGCCGCCAGAACCAGCGAGAGGCCCACTTCA
TCAAGCGCCTCTACCAAGGCCAGCTGCCTTTTCCCAACCACGCTGAAAGGCAGAAGCAGTTCGAATTTGT
GGGCTCCGCCCCCACTCGCAGGACCAAGCGCACTCGGAGGCCCCAGTCCCAAACGTAG

Translation (205 aa):
MGAARLLPNLTLCLQLLILCCQTQYVRDQGAMTDQLSRRQIREYQLYSRTSGKHVQVTGRRISATAEDGN
KFAKLIVETDTFGSRVRIKGAESEKYICMNKRGKLIGKPSGKSKDCVFTEIVLENNYTAFQNARHEGWFM
AFTRQGRPRQASRSRQNQREAHFIKRLYQGQLPFPNHAERQKQFEFVGSAPTRRTKRTRRPQSQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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