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Report for CCDS4692.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4692.2 Public Homo sapiens 6 MUCL3 24 110 108 CCDS HistoryNCBI Gene:135656Re-query CCDS DB by CCDS ID:4692.2See the combined annotation on chromosome 6 in Sequence Viewer

Public Note for CCDS 4692.1
The coding region has been updated to extend the N-terminus to one that is more supported by available conservation data. The extended 5' CDS lacks transcript support in human, but is supported by transcript data in mouse (AK131887.1, AK164929.1, BC150798.1 and four ESTs). The human and mouse splice sites are conserved. In addition, the human sequence includes an additional tandem repeat region in the second exon, which makes it longer than the equivalent exon in mouse.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 4692.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000462446.6 ENSP00000417182.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000462446.6Link to Ensembl Protein Viewer:ENSP00000417182.1Re-query CCDS DB by Nucleotide ID:ENST00000462446Re-query CCDS DB by Protein ID:ENSP00000417182
Original member Current member NCBI NM_080870.4 NP_543146.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_080870.4Link to Protein Sequence:NP_543146.2Re-query CCDS DB by Nucleotide ID:NM_080870Re-query CCDS DB by Protein ID:NP_543146Link to BLAST:NP_543146.2

Chromosomal Locations for CCDS 4692.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 30941000 30941081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30948547 30952499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30952971 30953117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4182 nt):
ATGGCCCAGCCGGTCCACAGCCTCTGCTCCGCCTTTGGCCTCCAGTGCTGCCTCCTCTTCCTTCTAGCTT
CTTGGGGGGCAGGTGCTACTACATTCCAAGAATATCAGAAAACTGGGGAACTCTCAACATCCGATCACAT
ATTTCCCCTCACTCCAGGCCTTGTTTATAGTATCCCTTTTGATCACATTGTTCTGCATTCAGGACAAAGA
CCTCCAGAGCTCCCTAAATCTACAGAAATCCATGAGCAAAAACGCCACTGCAACACCACACGCCATTCTA
AGCCAACTGACAAGCCTACAGGCAACTCCAAAACTATAGACCACAAAAGCTCTACAGATAATCATGAGGC
TCCTCCCACTTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGCTCTGTT
GATCCTGCTGACTCCACTACCACACATAAAGAATCCGCTGGAAAAAAACATATAACGCCAGCACCCAAGA
GCAAAATAAACTGTCGTAAGTCCACAACAGGCAAATCAACGGTAACAAGAAAATCAGATAAAACTGGAAG
ACCTTTGGAAAAGTCCATGAGTACTTTGGATAAGACAAGTACCAGCTCACATAAGACTACAACTTCCTTC
CACAACTCAGGCAATTCACAGACCAAGCAAAAAAGCACATCTTTTCCAGAAAAAATCACAGCAGCCTCAA
AAACAACATACAAGACCACAGGAACCCCAGAAGAGTCAGAAAAAACTGAAGATTCCAGAACAACAGTTGC
CTCAGACAAGCTCCTGACAAAAACTACAAAAAACATACAAGAGACCATATCAGCCAATGAGCTCACACAA
TCTCTAGCAGAGCCTACAGAACATGGAGGAAGGACAGCCAATGAGAACAACACACCATCCCCAGCAGAGC
CTACAGAAAATAGAGAAAGGACAGCCAATGAGAACACCACACTATCCCCAGCAGAGCCTATAGAAAATAG
AGAAAGGACAGCCAATGAGAACACCGCACCATTCCCAGCAGGGCCTACAGAAAATAGAGAAATGACAGCC
AATGAGAATACCACACTATTCCCAGCAGAGCCTACAGAACATGGAGAAAGGACAGCCAATGAGAACACCA
CACCATCCCCAGCAGAGCCTACAGAACATGGAGAAAGGACAGCCAATGAGAACACTACACCATCCCCAGC
AGAGCCTACAGAACATGGAGAAAGGACCCCATTTGCCAATGACAAAACCACATCATCCTCAGCAGAGTCT
ACAGAACATGGAGAAAGGACCCCACTGGCCAACGAGAACACCACACCATCCCCAGCAGAGCCTACAGAAA
ATAGAGAAAGGACAGCCAATGAGAACACCACACCATCCCCAGCAGGGCCTACAGAAAACAGAGAAACGAC
AGCCAACGAGAAGACCACACTATCCCCAGTAGAGCCTACAGAAAATAGAGAAACAACAGCCAATGAGAAG
ACCACACCATCCCCAGCAGAGCCTACAGAAAATGGACAAAGGACCCCATTTGCCAATGAGAAAACCACAT
CATCCTCAGCAGAGCCTACAGAACACGGAGAAAGGACCCCACTGGCCAATGAGAACACCACACCATCCCC
AGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAAGACCACACCATCCCCAGCAGAGCCTACA
GAAAATGGAGACAGGACTCCTTTGGCCAATGAGAAGACCACGCCATCTCTAGCAGAGCCTACAGAAAATG
GACAAAGGACCCCATTTGCCAATGAGAAGACCACATCATCCTCAGCAGAGCCTACAGAACACGAAGAAAG
GACTCCACTGGCCAATGAGAACACCACACCATCCCCGGCAGAGCCTACAGAAAATAGAGAAAGGACAGCC
AATGAGAACACCACACCATCCCCAGCAGGGCCTACAGAAAATAGAGAAATGACAGCCAACGAGAAGACCA
CACTATTCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAAGACCACATCATCCCCAGC
AGAGCCTACAGAAAATGGACAAAGGACCCCATTTGCCAATGAGAAAACCACATCATCCTCAGCAGAGCCT
ACAGAACACGGAGAAAGGACCCCACTGGCCAATGAGAACACCACACTATCCCCAGCAGAGCCTACAGAAA
ATAGAGAAAGGACAGCCAATGAGAAGACCACACCATTCCCAGCAGAGCCTACAGAAAATAGAGAAAGGAC
AGCCAATGAGAACACCACACCATCCCCAGCACAGCCTACAGAAAATGGAGACAGGACTCCATTGGCCAAT
GAGAAGACCACACCATCTCTAGCAGAGCCTACAGAAAATGGAAAAAGGACCCCATTTGCCAATGAGAAGA
CCACATCATCCTCAGCAGAGCCTACAGAACACGCAGAAAGGACTCCACTGGCCAATGAGAACACCACATC
ATCCCCAGCAGAGCCTACAGAAAATAGAGAAAGGACAGCCAATGAGAAGACCACACAATTCCCAGCAGAG
CCTACAGAAAATAGAGAAAGCACAGCCAATGAGAAGACCACACCATTCCCAGCAGAGCCTACAGAAAATA
GAGAATGGACAGCCAATGAGAACACCACACTATCCCCAGCAGAGCCTACAGAACATGAAGAAATGACCCC
ATTGGCCAATGAGAAGACCACACTATCCCCAGCAGAGCCTACAGAAAATGGAGAAAGGACCCCATTTACC
AATGAGAAGACCACACCATCCTCAGCAGAGCCTACAGAACATGGAGAAAGGACCCCACTGGCCAATGAGA
TCACCACACCATCCCGAGCAGAGCCTACAGAACATGGAGAAAGGATAGCCAATGAGAAGGCCACACCATC
CCCAGCAAAGCCTACAGAACATGGAGAAACGACAGTCAATGAGGACACCACACCATCCTCAGCAGAGCCT
ACAGAAAATGGAGAAAGGACCCCACTGGCCAATGAGAACACCACAACATCCCCAACAGAGTCTACAGAAC
ATGGAGAAAGGACAGCCAATGAGAAGACCACACCATCCCCAGCAGAGCCTACAGAACATGGAGAAAGGAC
ACCATCAGCCAATGAGAAGACCATACCATCTCCAGCAAAGCCTACAGAACACGAAGAAATGACCCCATCG
GCCAATGAGAACACCACACCATCCCCAGTAAAGCCTACAGAACATGGAGAAAAGACTACATTGGCCAATG
AGAAGATCACACTATCCCCAGAAGGGCCTACAGAACATGGAGCAAAAACTACGTCGGCCAATGAGAAGAT
CACACCATCCCTAGCAAAGCCTACAGAACATGGAGAAAGGACCACATCACCCAATGACAAGATCACCTCA
TCTGCAGCAGAGTCTACAGAACATAGAGATAGGGCTACATCAGCCAATGTGATCACACCAGCCCCAGCAG
AGCCTATAAAACATGCAAAAAGGACCACATTGGCCCATGAGAAGATGACACAAGTCACAGAAAAGTCCAC
AGAACACCCAGAAAAGACCACGTCAACCACAGAGAAAACCACAAGAACCCCAGAAAAGCCTACGCTATAC
TCAGAGAAGACCATATGCACCAAAGGGAAAAACACACCAGTCCCAGAAAAGCCTACAGAAAACCTGGGGA
ACACCACACTGACCACTGAGACCATAAAAGCCCCAGTAAAGTCCACAGAAAACCCAGAAAAAACAGCAGC
AGTCACAAAGACTATAAAACCTTCAGTCAAGGTCACAGGAGACAAATCTCTCACTACTACCTCTTCTCAT
CTAAATAAAACTGAAGTTACTCATCAGGTGCCCACTGGTTCTTTCACCCTCATTACATCTAGAACGAAGC
TGAGTTCTATCACATCAGAAGCCACAGGAAACGAGAGCCATCCATACCTCAATAAAGATGGCTCACAGAA
AGGTATCCACGCTGGACAGATGGGAGAGAATGATTCATTCCCTGCATGGGCCATAGTTATTGTGGTCCTG
GTGGCTGTGATTCTCCTCCTGGTGTTCCTTGGCCTGATCTTCTTGGTCTCCTATATGATGCGGACACGCC
GCACACTAACCCAGAACACCCAGTACAATGATGCAGAGGATGAGGGTGGCCCCAATTCCTACCCGGTCTA
CCTGATGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACGGTGA

Translation (1393 aa):
MAQPVHSLCSAFGLQCCLLFLLASWGAGATTFQEYQKTGELSTSDHIFPLTPGLVYSIPFDHIVLHSGQR
PPELPKSTEIHEQKRHCNTTRHSKPTDKPTGNSKTIDHKSSTDNHEAPPTSEENSSNQGKDPMIRNQRSV
DPADSTTTHKESAGKKHITPAPKSKINCRKSTTGKSTVTRKSDKTGRPLEKSMSTLDKTSTSSHKTTTSF
HNSGNSQTKQKSTSFPEKITAASKTTYKTTGTPEESEKTEDSRTTVASDKLLTKTTKNIQETISANELTQ
SLAEPTEHGGRTANENNTPSPAEPTENRERTANENTTLSPAEPIENRERTANENTAPFPAGPTENREMTA
NENTTLFPAEPTEHGERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFANDKTTSSSAES
TEHGERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRETTANEKTTLSPVEPTENRETTANEK
TTPSPAEPTENGQRTPFANEKTTSSSAEPTEHGERTPLANENTTPSPAEPTENRERTANEKTTPSPAEPT
ENGDRTPLANEKTTPSLAEPTENGQRTPFANEKTTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTA
NENTTPSPAGPTENREMTANEKTTLFPAEPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEP
TEHGERTPLANENTTLSPAEPTENRERTANEKTTPFPAEPTENRERTANENTTPSPAQPTENGDRTPLAN
EKTTPSLAEPTENGKRTPFANEKTTSSSAEPTEHAERTPLANENTTSSPAEPTENRERTANEKTTQFPAE
PTENRESTANEKTTPFPAEPTENREWTANENTTLSPAEPTEHEEMTPLANEKTTLSPAEPTENGERTPFT
NEKTTPSSAEPTEHGERTPLANEITTPSRAEPTEHGERIANEKATPSPAKPTEHGETTVNEDTTPSSAEP
TENGERTPLANENTTTSPTESTEHGERTANEKTTPSPAEPTEHGERTPSANEKTIPSPAKPTEHEEMTPS
ANENTTPSPVKPTEHGEKTTLANEKITLSPEGPTEHGAKTTSANEKITPSLAKPTEHGERTTSPNDKITS
SAAESTEHRDRATSANVITPAPAEPIKHAKRTTLAHEKMTQVTEKSTEHPEKTTSTTEKTTRTPEKPTLY
SEKTICTKGKNTPVPEKPTENLGNTTLTTETIKAPVKSTENPEKTAAVTKTIKPSVKVTGDKSLTTTSSH
LNKTEVTHQVPTGSFTLITSRTKLSSITSEATGNESHPYLNKDGSQKGIHAGQMGENDSFPAWAIVIVVL
VAVILLLVFLGLIFLVSYMMRTRRTLTQNTQYNDAEDEGGPNSYPVYLMEQQNLGMGQIPSPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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