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Report for CCDS48285.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48285.1 Public Mus musculus 1 Erbb4 23 108 98 CCDS HistoryNCBI Gene:13869Re-query CCDS DB by CCDS ID:48285.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48285.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000121473.7 ENSMUSP00000114123.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121473.7Link to Ensembl Protein Viewer:ENSMUSP00000114123.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000121473Re-query CCDS DB by Protein ID:ENSMUSP00000114123
Original member Current member NCBI NM_010154.2 NP_034284.1 Accepted alive Link to Nucleotide Sequence:NM_010154.2Link to Protein Sequence:NP_034284.1Re-query CCDS DB by Nucleotide ID:NM_010154Re-query CCDS DB by Protein ID:NP_034284Link to BLAST:NP_034284.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034284.1 1292 Q61527-3 1292 100% 0 0

Chromosomal Locations for CCDS 48285.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 68040041 68040486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68042441 68042738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68071518 68071688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68073098 68073195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68075418 68075564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68078536 68078611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68080640 68080795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68198842 68199027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68250580 68250678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68254529 68254651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68259181 68259313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68290243 68290317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68298287 68298441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68305845 68305938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68309595 68309727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68328068 68328267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68330192 68330282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68331220 68331293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68339357 68339483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68343840 68343953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68346546 68346687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68349301 68349419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68370455 68370520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68396181 68396315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68560496 68560682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 68740382 68740533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 69107675 69107756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3879 nt):
ATGAAGCTGGCGACGGGACTCTGGGTCTGGGGGAGCCTTCTGATGGCAGCGGGGACCGTCCAGCCCAGCG
CTTCTCAGTCAGTGTGCGCAGGAACAGAGAACAAACTGAGCTCTCTCTCTGACCTGGAACAGCAGTACCG
AGCCTTGCGCAAATACTATGAAAACTGCGAGGTAGTCATGGGCAACCTGGAGATCACCAGCATCGAGCAC
AACCGGGACCTCTCCTTCCTGCGGTCTATCCGAGAAGTCACAGGCTACGTCCTGGTGGCCCTCAACCAGT
TTCGTTACTTGCCTCTGGAGAATTTACGCATTATTCGTGGGACAAAACTATATGAAGATCGCTATGCCTT
AGCGATATTCTTAAACTACAGGAAAGATGGCAACTTTGGACTCCAAGAACTTGGATTAAAGAACCTGACC
GAAATACTAAATGGTGGAGTCTATGTAGACCAGAACAAATTCCTATGTTATGCTGACACTATACACTGGC
AAGATATTGTTCGGAATCCATGGCCTTCCAACATGACTCTGGTGTCAACAAATGGAAGTTCTGGATGTGG
AAGATGCCATAAGTCTTGCACTGGCCGATGCTGGGGACCCACAGAAAATCACTGCCAGACCTTGACCAGA
ACTGTGTGTGCTGAACAATGTGATGGCAGGTGCTATGGACCCTACGTTAGTGACTGCTGCCATCGAGAAT
GTGCTGGAGGCTGCTCAGGACCAAAGGACACTGACTGCTTTGCCTGCATGAACTTCAATGACAGTGGAGC
CTGCGTTACTCAATGTCCCCAAACATTTGTCTACAATCCAACCACCTTTCAACTGGAACACAACTTCAAT
GCAAAGTACACGTATGGAGCATTCTGTGTTAAGAAATGTCCACATAACTTCGTGGTAGATTCCAGTTCTT
GTGTACGAGCCTGCCCTAGTTCTAAGATGGAAGTAGAAGAAAATGGGATTAAAATGTGTAAGCCTTGCAC
CGATATTTGCCCCAAAGCATGTGATGGAATCGGCACGGGATCACTGATGTCTGCTCAGACTGTGGATTCA
AGTAACATTGACAAATTCATAAACTGCACAAAGATCAATGGCAATCTCATCTTTCTTGTCACTGGCATTC
ATGGAGACCCTTACAATGCTATTGACGCCATAGATCCAGAGAAACTGAATGTCTTTCGGACTGTCAGAGA
AATAACAGGTTTCCTGAACATACAGTCTTGGCCCCCAAATATGACAGATTTCAGTGTTTTCTCCAACCTC
GTCACAATTGGAGGAAGAGTCCTCTACAGTGGTCTCTCATTGCTGATCCTCAAACAACAAGGTATCACTT
CCCTACAGTTCCAGTCTCTGAAGGAAATCAGTGCGGGCAATATCTACATCACTGACAACAGCAACCTGTG
TTATTACCATACCATTAACTGGACAACACTCTTCAGCACCATTAACCAGAGAATAGTGATCCGAGATAAC
AGAAGAGCTGAGAATTGTACTGCTGAAGGCATGGTATGCAACCACCTGTGTTCAAATGATGGTTGTTGGG
GACCTGGGCCGGACCAGTGCCTGTCATGTCGGCGCTTCAGCAGGGGAAAGATCTGCATAGAGTCTTGCAA
CCTTTATGATGGGGAATTTCGAGAGTTTGAAAACGGCTCCATCTGTGTTGAGTGTGACTCCCAGTGTGAG
AAAATGGAAGATGGACTCCTCACATGCCATGGACCGGGACCTGACAACTGCACAAAGTGCTCTCATTTTA
AGGATGGTCCAAACTGTGTGGAGAAATGTCCAGATGGCCTACAGGGAGCAAACAGTTTCATTTTTAAGTA
TGCAGATCAGGATCGGGAGTGCCACCCTTGCCATCCAAACTGCACCCAGGGGTGTAACGGTCCCACTAGT
CATGACTGCATTTACTACCCATGGACGGGCCATTCCACTTTACCACAACACGCTAGAACTCCACTGATTG
CAGCCGGAGTCATTGGAGGCCTCTTCATCCTGGTGATCATGGCTTTGACATTTGCTGTCTATGTCAGAAG
AAAGAGCATCAAAAAGAAACGTGCTTTGAGGAGATTCCTGGAGACAGAGCTGGTAGAGCCCTTAACTCCC
AGTGGCACGGCACCCAATCAAGCTCAACTTCGCATTTTGAAGGAAACCGAACTAAAGAGGGTAAAGGTCC
TTGGCTCGGGAGCTTTTGGAACCGTTTATAAAGGTATTTGGGTGCCTGAAGGTGAAACAGTGAAAATCCC
TGTGGCTATAAAGATCCTCAATGAAACAACTGGCCCCAAAGCCAACGTGGAGTTCATGGATGAGGCTCTG
ATCATGGCAAGTATGGATCACCCACACCTAGTTCGCCTATTGGGAGTGTGTCTGAGTCCCACTATCCAGT
TGGTTACGCAGCTGATGCCGCATGGCTGCCTACTGGACTATGTTCATGAACACAAGGATAACATTGGATC
ACAGCTGCTGTTGAACTGGTGTGTCCAGATTGCTAAGGGAATGATGTACCTAGAAGAAAGACGGCTTGTT
CATCGGGATCTGGCAGCCCGCAATGTCTTAGTGAAATCTCCAAATCATGTTAAAATCACAGATTTTGGAC
TGGCCCGGCTCTTGGAAGGAGATGAAAAAGAATACAATGCTGATGGTGGCAAGATGCCAATTAAATGGAT
GGCTCTGGAATGTATACATTATAGGAAATTCACACATCAAAGTGATGTTTGGAGCTATGGCGTCACTATA
TGGGAACTGATGACCTTTGGAGGAAAGCCCTATGATGGAATTCCAACCCGAGAAATCCCCGATTTACTGG
AGAAAGGAGAGCGTCTGCCTCAGCCTCCCATCTGCACTATTGATGTTTACATGGTCATGGTCAAATGTTG
GATGATCGATGCTGACAGCAGACCTAAATTCAAAGAACTGGCTGCTGAGTTTTCAAGAATGGCTAGAGAC
CCTCAAAGATACCTAGTTATTCAGGGTGATGATCGTATGAAGCTTCCCAGTCCAAATGACAGCAAATTCT
TCCAGAATCTCTTGGATGAAGAGGATTTGGAAGACATGATGGATGCTGAGGAATATTTGGTCCCCCAGGC
TTTCAACATACCTCCTCCCATCTACACATCCAGAACAAGAATTGACTCCAATAGGAATCAGTTTGTGTAC
CAAGATGGGGGCTTTGCTACACAACAAGGAATGCCCATGCCCTACAGAGCCACAACCAGCACCATACCAG
AGGCTCCAGTAGCTCAGGGTGCAACGGCTGAGATGTTTGATGACTCCTGCTGTAATGGTACCCTACGAAA
GCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACTCAGAGGTATAGTGCTGATCCCACAGTGTTCGCC
CCAGAACGGAATCCTCGAGGAGAACTGGATGAAGAAGGCTACATGACTCCAATGCATGACAAGCCCAAAC
AAGAATATCTGAATCCTGTGGAAGAGAACCCTTTTGTGTCCCGAAGGAAGAATGGAGATCTTCAAGCTTT
AGATAATCCGGAGTATCACAGTGCTTCCAGCGGTCCACCCAAGGCGGAGGATGAATACGTGAATGAGCCT
CTATACCTCAACACCTTCGCCAATGCCTTGGGGAGTGCAGAGTACATGAAAAACAGTGTACTGTCTGTGC
CAGAGAAAGCCAAGAAAGCATTTGACAACCCCGACTACTGGAACCACAGCCTGCCACCCCGGAGCACCCT
TCAGCACCCAGACTACCTGCAGGAATACAGCACAAAATATTTTTATAAACAGAATGGACGGATCCGCCCC
ATTGTGGCAGAGAATCCTGAGTACCTCTCGGAGTTCTCGCTGAAGCCTGGCACTATGCTGCCCCCTCCGC
CCTACAGACACCGGAATACTGTGGTGTGA

Translation (1292 aa):
MKLATGLWVWGSLLMAAGTVQPSASQSVCAGTENKLSSLSDLEQQYRALRKYYENCEVVMGNLEITSIEH
NRDLSFLRSIREVTGYVLVALNQFRYLPLENLRIIRGTKLYEDRYALAIFLNYRKDGNFGLQELGLKNLT
EILNGGVYVDQNKFLCYADTIHWQDIVRNPWPSNMTLVSTNGSSGCGRCHKSCTGRCWGPTENHCQTLTR
TVCAEQCDGRCYGPYVSDCCHRECAGGCSGPKDTDCFACMNFNDSGACVTQCPQTFVYNPTTFQLEHNFN
AKYTYGAFCVKKCPHNFVVDSSSCVRACPSSKMEVEENGIKMCKPCTDICPKACDGIGTGSLMSAQTVDS
SNIDKFINCTKINGNLIFLVTGIHGDPYNAIDAIDPEKLNVFRTVREITGFLNIQSWPPNMTDFSVFSNL
VTIGGRVLYSGLSLLILKQQGITSLQFQSLKEISAGNIYITDNSNLCYYHTINWTTLFSTINQRIVIRDN
RRAENCTAEGMVCNHLCSNDGCWGPGPDQCLSCRRFSRGKICIESCNLYDGEFREFENGSICVECDSQCE
KMEDGLLTCHGPGPDNCTKCSHFKDGPNCVEKCPDGLQGANSFIFKYADQDRECHPCHPNCTQGCNGPTS
HDCIYYPWTGHSTLPQHARTPLIAAGVIGGLFILVIMALTFAVYVRRKSIKKKRALRRFLETELVEPLTP
SGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL
IMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV
HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI
WELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD
PQRYLVIQGDDRMKLPSPNDSKFFQNLLDEEDLEDMMDAEEYLVPQAFNIPPPIYTSRTRIDSNRNQFVY
QDGGFATQQGMPMPYRATTSTIPEAPVAQGATAEMFDDSCCNGTLRKPVAPHVQEDSSTQRYSADPTVFA
PERNPRGELDEEGYMTPMHDKPKQEYLNPVEENPFVSRRKNGDLQALDNPEYHSASSGPPKAEDEYVNEP
LYLNTFANALGSAEYMKNSVLSVPEKAKKAFDNPDYWNHSLPPRSTLQHPDYLQEYSTKYFYKQNGRIRP
IVAENPEYLSEFSLKPGTMLPPPPYRHRNTVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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