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Report for CCDS57556.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
57556.1 |
Public |
Mus musculus |
7 |
Man2a2 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:140481](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:57556.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 57556.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000098346.4 |
ENSMUSP00000095949.3 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000098346.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000095949.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000098346](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000095949](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_172903.4 |
NP_766491.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_172903.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_766491.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_172903](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_766491](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_766491.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_766491.2 |
1152 |
Q8BRK9-1 |
1152 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 57556.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3459 nt): ATGAAGCTGAAAAAGCAGGTGACGGTGTGTGGGGCTGCTATCTTCTGTGTGGCCGTCTTTTCTCTGTACC TTATGCTGGACCGAGTGCAGCATGATCCTGCCAGACACCAGAATGGTGGGAACTTCCCCAGGAGCCAAAT CTCTGTGCTACAGAACCGGATAGAACAGCTGGAACAACTGCTGGAGGAAAACCATGACATCATAAGCCGT ATCAAGGACTCTGTACTGGAACTGACAGCCAATGCGGAGGGCCCGCCAGCCCTGCTGCCCTACCATACCG CCAACGGTTCCTGGGCTGTGCTCCCGGAGCCCCGGCCCAGCTTCTTCTCCGTCTCCCCCCAGGACTGCCA GTTTGCTTTGGGGGGACGGGGTCAGAAGCCAGAACTACAGATGTTAACCGTGTCTGAGGATTTGCCGTTT GACAATGTGGAGGGTGGCGTGTGGAGGCAAGGCTTTGACATCTCCTACAGCCCAAATGACTGGGACACTG AAGACCTGCAAGTGTTTGTGGTGCCTCACTCCCACAACGATCCAGGCTGGATCAAGACTTTTGACAAGTA CTACACGGAACAGACCCAGCACATCCTCAACAGCATGGTGTCCAAGCTGCAGGAAGACCCCCGGCGGCGC TTTCTCTGGGCAGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAGTGCCCAAAAGAGGGCAGCAG TTCGAAGGCTGGTGGGAAATGGGCAGCTGGAGATTGCGACAGGCGGATGGGTGATGCCCGACGAGGCCAA CTCCCATTACTTTGCCTTGGTTGACCAGCTCATCGAGGGGCACCAGTGGCTGGAGAGAAACCTGGGTGCA ACCCCGCGCTCGGGCTGGGCAGTGGACCCCTTTGGACACAGCTCCACCATGCCTTACCTGCTGCGCCGTG CCAACCTGACCAGCATGCTGATTCAGAGGGTGCATTATGCCATCAAGAAGCACTTTGCTGCCACTCATAG CCTGGAGTTCATGTGGAGGCAGATGTGGGATTCAGACTCCAGCACAGACATCTTTTGCCACATGATGCCC TTCTACAGCTACGACGTTCCACACACCTGTGGCCCCGATCCCAAGATCTGCTGCCAGTTTGATTTCAAAC GTCTGCCGGGTGGGAGAATCAATTGCCCTTGGAAGGTGCCACCCCGGGCTATTACAGAAGCCAATGTGGC AGACAGGGCAGCCCTGCTCCTGGACCAGTACCGGAAGAAGTCCCGGCTGTTCCGAAGCAACGTCCTCCTC GTGCCACTTGGTGATGACTTCCGGTATGACAAGCCCCAGGAATGGGATGCCCAGTTCTTCAACTACCAGC GGCTCTTTGACTTCCTCAACAGCAAGCCTGAGTTCCATGTGCAGGCCCAGTTTGGGACCCTCTCTGAGTA TTTCGATGCCCTGTATAAGAGGACAGGAGTAGAGCCTGGTGCCCGGCCTCCAGGGTTTCCTGTGCTGAGT GGGGACTTCTTCTCCTACGCTGACCGGGAGGACCACTACTGGACAGGCTATTACACCTCCCGGCCTTTCT ACAAGAGCTTGGACCGCGTCCTAGAAGCCCACCTGCGTGGGGCAGAGATTCTATACAGCCTGGCTTTGGC CCATGCCCGCCGTTCTGGACTGGCCGGCCAGTACCCGCTGTCTGATTTTGCTCTTCTGACGGAAGCTCGG CGTACACTGGGCCTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGCAGTAGTGGTAGACT ACGGGGTCAGGTTGCTGCGTTCCCTGGTCAGCCTCAAGCAGGTTATCATCAATGCTGCCCACTACCTGGT GCTGGGGGACCAGGAGACCTACAGCTTTGACCCTGGGACACCCTTCCTCCAAATGGATGACAGCCGTGTA AGCCATGATGCCCTGCCCGAGCGCACGGTGATCCGGCTGGACTCCTCACCCAGGTTTGTGGTGGTATTTA ACCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGCGCGTCCTTTC AGAGGAGGGCCAGCCCCTGTCTGTGCAGATCAGTGTGCACTGGAGCTCGGCTACGGACATGGTCCCTGAT GTCTACCAGGTGTCAGTACCCGTCCGCCTGCCAGGCCTGGGCCTGGGTGTGCTGCAGCTGCAGCCAGATC TCGATGGGCCCTACACGCTGCAGTCTTCCGTGCGGGTCTACCTGAACGGCGTGAAACTGTCCGTCAGCAG GCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGCCATCAGCAATCGCTACATG CAGGTCTGGTTCTCCGGCCTTACTGGGCTTCTCAAGAGCATCCGACGGGTGGATGAGGAGCAGGAGCAGC AGATGGAACTGGAGTTCCTCGTCTACGGCACCCGTACCTCCAAGGACAAGAGTGGCGCCTACCTCTTCCT GCCTGATAGCGAGGCTAAGCCCTACGTCCCTAAGAAACCTCCTGTGCTGCGTGTCACCGAAGGCCCTTTC TTCTCAGAGGTGGCTGTGTACTATGAGCACTTTCACCAAGTGATTCGACTTTATAACCTGCCAGGGGTAG AGGGGCTGTCTCTGGACATGTCATTCCAGGTAGATATCAGGGACTATGTGAACAAGGAACTGGCCCTGCG CATCCACACAGACATTGACAGCCAGGGCACTTTCTTCACAGACCTCAATGGCTTTCAGATACAGCCCCGG CAGTATCTGAAGAAGCTGCCCCTGCAGGCTAATTTCTACCCTATGCCAGTCATGGCCTATATCCAAGATT CCCAGAGGCGCCTCACGCTGCACACTGCCCAGGCTCTGGGTGTCTCCAGCCTCGGTAATGGCCAGCTGGA GGTGATCTTGGACCGAAGGCTAATGCAGGATGACAACCGGGGACTAGGCCAAGGGCTCAAAGACAACAAG ATCACCTGCAACCGTTTCCGCCTCCTGTTAGAACGTCGGACCACAATGAGCCCAGAGGTGCATCAGGAGC AGGAGCGTTCTACAAGCTACCCGTCCCTCCTCAGCCACCTGACATCCATGTACCTCAGCACACCTCCTCT TGTCTTACCCGTGGCCAAGAGGCAGGGCACTAGCCCTGCTCTGCGCTCTTTCCACCCTCTGGCTTCTCCA TTGCCCTGTGACTTCCATTTGCTCAATCTGCGCATGCTCCCAGCCGAGGACACCTTGCCCGCAACTGACT CTGCGCTCATCTTACACCGCAAGGGGTTTGACTGTGGCCTTGAAGCCAAGAACCTGGGCTTCAACTGTAC CACAAGCCAAGGCAAGCTAGCCCTGGGGAGCCTCTTCCATGGCCTGGATGTGACCTTCCTGCAGCCAACC TCCTTGACTTTGCTATACCCTCTGGCCTCACCTTCCAACAGCACTGACATCTCTCTGGAGCCCATGGAGA TCAGCACCTTCCGCCTGCGCTTGGGCTAG
Translation (1152 aa): MKLKKQVTVCGAAIFCVAVFSLYLMLDRVQHDPARHQNGGNFPRSQISVLQNRIEQLEQLLEENHDIISR IKDSVLELTANAEGPPALLPYHTANGSWAVLPEPRPSFFSVSPQDCQFALGGRGQKPELQMLTVSEDLPF DNVEGGVWRQGFDISYSPNDWDTEDLQVFVVPHSHNDPGWIKTFDKYYTEQTQHILNSMVSKLQEDPRRR FLWAEVSFFAKWWDNISAQKRAAVRRLVGNGQLEIATGGWVMPDEANSHYFALVDQLIEGHQWLERNLGA TPRSGWAVDPFGHSSTMPYLLRRANLTSMLIQRVHYAIKKHFAATHSLEFMWRQMWDSDSSTDIFCHMMP FYSYDVPHTCGPDPKICCQFDFKRLPGGRINCPWKVPPRAITEANVADRAALLLDQYRKKSRLFRSNVLL VPLGDDFRYDKPQEWDAQFFNYQRLFDFLNSKPEFHVQAQFGTLSEYFDALYKRTGVEPGARPPGFPVLS GDFFSYADREDHYWTGYYTSRPFYKSLDRVLEAHLRGAEILYSLALAHARRSGLAGQYPLSDFALLTEAR RTLGLFQHHDAITGTAKEAVVVDYGVRLLRSLVSLKQVIINAAHYLVLGDQETYSFDPGTPFLQMDDSRV SHDALPERTVIRLDSSPRFVVVFNPLEQERLSVVSLLVNSPRVRVLSEEGQPLSVQISVHWSSATDMVPD VYQVSVPVRLPGLGLGVLQLQPDLDGPYTLQSSVRVYLNGVKLSVSRQSAFPVRVVDSGASDFAISNRYM QVWFSGLTGLLKSIRRVDEEQEQQMELEFLVYGTRTSKDKSGAYLFLPDSEAKPYVPKKPPVLRVTEGPF FSEVAVYYEHFHQVIRLYNLPGVEGLSLDMSFQVDIRDYVNKELALRIHTDIDSQGTFFTDLNGFQIQPR QYLKKLPLQANFYPMPVMAYIQDSQRRLTLHTAQALGVSSLGNGQLEVILDRRLMQDDNRGLGQGLKDNK ITCNRFRLLLERRTTMSPEVHQEQERSTSYPSLLSHLTSMYLSTPPLVLPVAKRQGTSPALRSFHPLASP LPCDFHLLNLRMLPAEDTLPATDSALILHRKGFDCGLEAKNLGFNCTTSQGKLALGSLFHGLDVTFLQPT SLTLLYPLASPSNSTDISLEPMEISTFRLRLG
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