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Report for CCDS25755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25755.1 Public Mus musculus 11 Dcxr 23 108 98 CCDS HistoryNCBI Gene:67880Re-query CCDS DB by CCDS ID:25755.1Re-query CCDS DB by GeneID:67880See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25755.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026144.4 ENSMUSP00000026144.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026144.4Link to Ensembl Protein Viewer:ENSMUSP00000026144.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000026144Re-query CCDS DB by Protein ID:ENSMUSP00000026144
Original member Current member NCBI NM_026428.3 NP_080704.2 Accepted alive Link to Nucleotide Sequence:NM_026428.3Link to Protein Sequence:NP_080704.2Re-query CCDS DB by Nucleotide ID:NM_026428Re-query CCDS DB by Protein ID:NP_080704Link to BLAST:NP_080704.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080704.2 244 Q91X52 244 100% 0 0

Chromosomal Locations for CCDS 25755.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 120725504 120725607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120725738 120725855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120725942 120726006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120726088 120726187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120726269 120726311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120726411 120726565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120726999 120727096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120727178 120727229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (735 nt):
ATGGACCTGGGGCTTGCAGGTCGGCGGGCGCTGGTCACCGGCGCGGGCAAAGGCATCGGGCGCAGCACTG
TG
CTGGCGTTGAAGGCGGCTGGTGCACAGGTTGTGGCGGTGAGTCGGACGCGAGAGGACCTGGACGACCT
G
GTCCGCGAGTGTCCTGGTGTGGAGCCTGTGTGTGTGGACCTGGCCGACTGGGAGGCCACAGAGCAGGCC
CTA
AGCAATGTGGGACCCGTGGACCTTCTGGTGAACAATGCTGCTGTGGCTCTGTTGCAGCCCTTCCTGG
AG
GTCACCAAGGAGGCCTGTGACACATCCTTCAATGTGAATCTTCGGGCTGTCATCCAGGTGTCTCAGAT
T
GTGGCCAAGGGCATGATAGCTCGGGGAGTTCCAGGAGCCATTGTGAATGTCTCCAGCCAGGCCTCCCAA
CGT
GCACTGACCAACCATACTGTCTACTGTTCCACCAAGGGTGCTCTGGACATGTTGACCAAGATGATGG
CC
CTAGAGCTTGGGCCCCACAAGATCCGTGTGAATGCAGTAAACCCCACAGTAGTGATGACACCCATGGG
C
CGGACCAACTGGAGTGACCCCCACAAAGCTAAGGCCATGCTGGATCGTATCCCACTGGGCAAGTTCGCT
G
AG
GTGGAGAACGTCGTGGACACCATTCTCTTCCTGCTGAGCAACCGGAGTGGCATGACCACTGGCTCCA
CT
TTGCCAGTGGATGGGGGCTTCCTGGCTACCTGA


Translation (244 aa):
MDLGLAGRRALVTGAGKGIGRSTVLALKAAGAQVVAVSRTREDLDDLVRECPGVEPVCVDLADWEATEQA
L
SNVGPVDLLVNNAAVALLQPFLEVTKEACD
TSFNVNLRAVIQVSQIVAKGMIARGVPGAIVNVSSQASQ
R
ALTNHTVY
CSTKGALDMLTKMMALELGPHKIRVNAVNPTVVMTPMGRTNWSDPHKAKAMLDRIPLGKFA
E
VENVVDTILFLLSNRSGMTTGSTLPVDGGFLAT



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser