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Report for CCDS20387.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20387.1 Public Mus musculus 6 Gpr27 23 108 98 CCDS HistoryNCBI Gene:14761Re-query CCDS DB by CCDS ID:20387.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20387.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000101122.2 ENSMUSP00000098680.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000101122.2Link to Ensembl Protein Viewer:ENSMUSP00000098680.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000101122Re-query CCDS DB by Protein ID:ENSMUSP00000098680
Original member Current member NCBI NM_008158.2 NP_032184.1 Accepted alive Link to Nucleotide Sequence:NM_008158.2Link to Protein Sequence:NP_032184.1Re-query CCDS DB by Nucleotide ID:NM_008158Re-query CCDS DB by Protein ID:NP_032184Link to BLAST:NP_032184.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032184.1 379 O54897 379 100% 0 0

Chromosomal Locations for CCDS 20387.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 99692679 99693818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1140 nt):
ATGGCGAACGCTAGTGAGCCGGGCGGCGGCGGCAGCGGCGGAGGGGCCGAGGCTGCCGCGCTGGGCCTTA
GGCTGGCCACGCTCAGCCTGCTGCTGTGCGTGAGCCTGGCGGGCAACGTGCTGTTCGCGCTGCTCATCGT
GCGGGAGCGCAGCCTGCACCGCGCGCCGTACTACCTGCTGCTCGACCTGTGCCTGGCCGACGGGCTGCGC
GCGCTCGCCTGCCTCCCGGCCGTCATGCTGGCGGCGCGGCGCGCGGCGGCCGCGGCGGGGACGCCGCCGG
GCGCGCTGGGCTGCAAGCTGCTGGCCTTCCTGGCCGCACTCTTCTGCTTCCACGCGGCCTTCCTGCTGCT
GGGCGTGGGCGTCACCCGCTACCTGGCCATCGCGCACCACCGCTTCTACGCCGAGCGCCTGGCCGGCTGG
CCGTGCGCCGCGATGCTGGTGTGCGCCGCCTGGGCGCTGGCTTTGGCCGCGGCCTTCCCGCCGGTGCTGG
ACGGCGGTGGCGCGGACGACGAGGACGCGCCGTGCGCCCTGGAGCAGCGACCCGACGGCGCCCCGGGTGC
GCTAGGCTTCCTGCTGCTCCTGGCCGCGGTGGTGGGCGCCACGCACCTCGTCTACCTCCGCCTGCTCTTC
TTCATCCACGACCGCCGCAAGATGCGACCCGCGCGCCTGGTGCCCGCCGTCAGCCACGACTGGACCTTCC
ACGGCCCGGGCGCCACCGGTCAGGCGGCCGCCAACTGGACGGCGGGCTTCGGCCGCGGGCCCACGCCACC
TGCGCTCGTGGGCATCAGGCCTGCAGGCCCGGGCCGCGGCGCCCGGCGCCTCCTGGTGCTGGAGGAGTTC
AAGACGGAGAAGAGGCTGTGCAAGATGTTCTACGCCATCACGCTGCTCTTCCTGCTCCTCTGGGGCCCCT
ATGTGGTGGCCAGTTACCTGCGCGTCCTGGTGCGCCCGGGAGCTGTCCCGCAGGCCTACCTGACAGCCTC
GGTGTGGCTGACATTCGCGCAGGCCGGCATCAACCCCGTGGTGTGTTTCCTCTTCAACCGGGAGCTGAGG
GACTGTTTCCGAGCCCAGTTTCCCTGCTGCCAGAGCCCCCAGGCCACGCAGGCCACCCTCCCCTGCGACC
TGAAAGGCATTGGTTTGTGA

Translation (379 aa):
MANASEPGGGGSGGGAEAAALGLRLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLLDLCLADGLR
ALACLPAVMLAARRAAAAAGTPPGALGCKLLAFLAALFCFHAAFLLLGVGVTRYLAIAHHRFYAERLAGW
PCAAMLVCAAWALALAAAFPPVLDGGGADDEDAPCALEQRPDGAPGALGFLLLLAAVVGATHLVYLRLLF
FIHDRRKMRPARLVPAVSHDWTFHGPGATGQAAANWTAGFGRGPTPPALVGIRPAGPGRGARRLLVLEEF
KTEKRLCKMFYAITLLFLLLWGPYVVASYLRVLVRPGAVPQAYLTASVWLTFAQAGINPVVCFLFNRELR
DCFRAQFPCCQSPQATQATLPCDLKGIGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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