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Report for CCDS34619.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34619.1 Public Homo sapiens 7 EEPD1 24 110 108 CCDS HistoryNCBI Gene:80820Re-query CCDS DB by CCDS ID:34619.1Re-query CCDS DB by GeneID:80820See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34619.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000242108.9 ENSP00000242108.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000242108.9Link to Ensembl Protein Viewer:ENSP00000242108.4Re-query CCDS DB by Nucleotide ID:ENST00000242108Re-query CCDS DB by Protein ID:ENSP00000242108
Original member Current member EBI ENST00000534978.1 ENSP00000442692.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534978.1Link to Ensembl Protein Viewer:ENSP00000442692.1Re-query CCDS DB by Nucleotide ID:ENST00000534978Re-query CCDS DB by Protein ID:ENSP00000442692
Original member Current member NCBI NM_030636.3 NP_085139.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030636.3Link to Protein Sequence:NP_085139.2Re-query CCDS DB by Nucleotide ID:NM_030636Re-query CCDS DB by Protein ID:NP_085139Link to BLAST:NP_085139.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_085139.2 569 Q7L9B9 569 100% 0 0

Chromosomal Locations for CCDS 34619.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 36154325 36155202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 36238985 36239036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 36281115 36281225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 36284686 36284820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 36287639 36287777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 36296993 36297187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 36299007 36299206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1710 nt):
ATGGGGAGCACCCTGGGCTGCCACCGCTCCATCCCCAGGGACCCCTCGGACCTGTCCCATAGCCGCAAGT
TCAGCGCAGCCTGTAACTTCAGCAACATTCTAGTGAATCAGGAGCGGCTCAACATCAACACTGCCACGGA
GGAGGAGCTGATGACCCTGCCTGGGGTGACGCGTGCCGTGGCACGCAGCATCGTGGAGTACCGAGAGTAT
ATCGGTGGCTTCAAGAAGGTGGAGGACCTGGCATTGGTCAGTGGTGTAGGCGCCACCAAGCTGGAGCAGG
TCAAGTTTGAGATCTGTGTGAGCAGCAAGGGCAGCTCAGCGCAGCACTCTCCCAGTTCCCTGCGGCGGGA
CCTGCTAGCGGAGCAGCAGCCTCACCACCTGGCCACAGCTGTGCCCCTCACCCCACGTGTTAACATCAAC
ACAGCCACCCCGGCCCAGCTCATGAGCGTGCGAGGCCTCTCGGAGAAAATGGCCCTCAGCATCGTGGACT
TCCGCCGTGAGCATGGGCCCTTTCGCAGCGTTGAGGACCTAGTGAGGATGGATGGTATCAATGCCGCCTT
CCTGGACAGGATCCGGCACCAGGTGTTTGCTGAGAGGTCCAGGCCCCCATCCACCCACACGAACGGGGGA
CTGACCTTCACCGCCAAGCCTCACCCGAGCCCCACTTCCCTGAGCCTGCAGAGTGAGGACCTGGACCTGC
CGCCAGGGGGGCCCACCCAGATTATCTCCACTCGGCCGTCCGTGGAGGCCTTTGGAGGCACAAGGGATGG
GAGGCCTGTGCTGAGGCTGGCCACCTGGAACTTGCAGGGCTGTTCCGTGGAGAAGGCCAACAACCCCGGG
GTGCGAGAGGTGGTGTGCATGACACTCCTGGAAAACAGCATCAAGCTTCTAGCTGTGCAAGAACTGCTTG
ACAGAGAGGCCTTGGAAAAGTTCTGCACGGAGCTAAACCAGCCGACCCTGCCCAACATCCGCAAGTGGAA
GGGGCCCCGGGGATGCTGGAAGGCTGTTGTTGCTGAGAAGCCCTCGAGTCAGCTCCAGAAGGGAGCTGGG
TATGCAGGATTCCTATGGGACGCGGCTGCCGGCATGGAGCTGAGAGACGCGGGTTCACAGGAGAGCTCGC
CAAGCAACGGGCACGGGAAGCTGGCGGGCCCCAGCCCATACCTCGGGAGGTTCAAGGTGGGAAGTCACGA
CCTGACCCTTGTTAACCTTCACCTGGCAGCCCTGACCCTCCTGGGGAGCGAGAATCCCAGCAAGAATCAC
AGTGATGGCCACCGGTTGGCGAGCTTTGCACAGACCCTACAGGAAACCCTGAAAGGAGAAAAGGATGTCA
TTATCTTAGGGGATTTTGGCCAAGGGCCAGACAGCAATGACTATGATATCCTGAGGAAAGAAAAGTTCCA
CCACCTGATCCCCGCGCACACCTTCACCAACATCAGCACCAAGAACCCTCAAGGCTCGAAGTCTCTGGAC
AACATCTGGATCAGTAAAAGCTTAAAGAAGGTTTTCACAGGTCACTGGGCTGTGGTGAGAGAAGGCCTCA
CGAACCCTTGGATTCCGGATAACTGGTCTTGGGGCGGGGTGGCTTCTGAACACTGCCCAGTGCTAGCCGA
GTTCTACACTGAAAAGGACTGGAGCAAGAAGGATGCCCCTCGGAACGGCAGCGGGGTGGCCTTGGAGCGA
AGTGAAGCCAACATCAAGCACGAGCGATGA

Translation (569 aa):
MGSTLGCHRSIPRDPSDLSHSRKFSAACNFSNILVNQERLNINTATEEELMTLPGVTRAVARSIVEYREY
IGGFKKVEDLALVSGVGATKLEQVKFEICVSSKGSSAQHSPSSLRRDLLAEQQPHHLATAVPLTPRVNIN
TATPAQLMSVRGLSEKMALSIVDFRREHGPFRSVEDLVRMDGINAAFLDRIRHQVFAERSRPPSTHTNGG
LTFTAKPHPSPTSLSLQSEDLDLPPGGPTQIISTRPSVEAFGGTRDGRPVLRLATWNLQGCSVEKANNPG
VREVVCMTLLENSIKLLAVQELLDREALEKFCTELNQPTLPNIRKWKGPRGCWKAVVAEKPSSQLQKGAG
YAGFLWDAAAGMELRDAGSQESSPSNGHGKLAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNH
SDGHRLASFAQTLQETLKGEKDVIILGDFGQGPDSNDYDILRKEKFHHLIPAHTFTNISTKNPQGSKSLD
NIWISKSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASEHCPVLAEFYTEKDWSKKDAPRNGSGVALER
SEANIKHER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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