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Report for CCDS44152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44152.1 Public Homo sapiens 1 TTC22 24 110 108 CCDS HistoryNCBI Gene:55001Re-query CCDS DB by CCDS ID:44152.1Re-query CCDS DB by GeneID:55001See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44152.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371276.9 ENSP00000360323.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371276.9Link to Ensembl Protein Viewer:ENSP00000360323.4Re-query CCDS DB by Nucleotide ID:ENST00000371276Re-query CCDS DB by Protein ID:ENSP00000360323
Original member Current member NCBI NM_001114108.2 NP_001107580.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001114108.2Link to Protein Sequence:NP_001107580.1Re-query CCDS DB by Nucleotide ID:NM_001114108Re-query CCDS DB by Protein ID:NP_001107580Link to BLAST:NP_001107580.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001107580.1 569 Q5TAA0-1 569 100% 0 0

Chromosomal Locations for CCDS 44152.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 54781243 54781779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54782325 54782477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54785983 54786144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54786957 54787075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54787711 54787826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54788042 54788097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54800597 54801163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1710 nt):
ATGGCGGAGCTGGAGGCTGTGGCCGACGATCTAGACGCCCTCATCGACGACCTGGACTACCTCCCGGGCC
ACTTTCACCTGGAGATGCAGTTGAACTTCGAGCCGCGCTCGCCGGCCCCACAGCGCGCCCGGGACCTGAA
GCTGCAGCGGGAGGGTCTGCGGCAGGAGCTCCAGCTGGCGGCCGCCCCGCAGCGCCCCGCTGTGCGTCAC
CTCCTGGGCGCTTTCGCATTCTACCTGGAGGAGCTGGACGAGGCCCGCGAGTGCTTCCTCGAGGTGGCCC
ACGAGCACCCGGGCAACCTCAATGCCTGGGCCAATCTGGCACACGTGTACGGGCGGCTGGGCCAGGAAGA
AGAGGAGGAGGCGTGCGCCGCACGGCTGGCCGACCTCATGGGCCTGGCAGAGGAGCCCGAGGCCGCCGGG
GACCCCCAGCTCCGCGCCGCTCGCTGCCTGGCCGAGCAGGGCTACGCGCATGGCTTCGACGTCGGCTGCG
CCAGCCCAGAGGAGCGTGCGCGGGGGCTGGCGGCAGGCATCGCGCTCTACGACAAGGCGCTAGGCTACGG
GCAGCAGATCCCGATGGAGGAGAAAAGGGGCTGGTATTTCACCATGGCAACACTCTACATCAGGCTAGAT
GGCATCTTCCTGGAGCTGGGCAGTGAGGAGCAGAAGAGACTGCCTGCCTTCAACCGCACGCTGGCCCTAC
TCCGGCAAGTGCTGAAGTCCGAGGACCCCCGCCACCGAGCCCTGGCCTGGTGCTACCTCGGGATGCTGCT
GGAGCGGAAGGACACCTTCTCCACCACCCCCATGGGCGTCCATGACTGCGGGTACTCAGGGACCGACCCT
CTAGACTGCTTCGGCAAGGCCATTGAGATTGCCAAGAACCAACCTCCCATCCTGAATCGCCTGGCAAAAA
TCTTCTACTTCCTGGGAAAGCAGGATATGGCCATTGGAACCTGCAACATGGCCCTGGATGTCCTACGAGA
TCCAGAACTCAACTGGCAGGCGTACTGCACAAGGGCCAAGATCCACATCAGAGCCTACCTGCATGACCTC
AAGCGGGCCAAGATGGGTCTCGGGGGCATGCCTGACAGGAACCACCTGGCCTGTGCCAAGGCTGACCTTG
AGGAAGTGGTCAGGGTGTGCCCAGGCTTCAAGGCGTACCTGGACATCGGCCAGGTCTACTACTATATGGG
CGTGGACGCGGTGCAGGAGCTGCTGGCGGTGGACGAGGCGGCGCTGAACCAGGCGCTGGTGTTCCTGGCC
AAGGCGGGCGAGTCGGAGCTGGGTGCCACGCTGCCCGAGCTGCAGCTGCTGCGCGGCAAGTGCCTGCGCA
TCAAGGGCGAGGACGCCAACGCGGCCGCCTGCTTCAAGCGCGCAGTGGAGCTGGACGACGCGGGCTCCAG
CCACACCGACGGCTTCGGCTGCCTGCTCGAGGCGCTGCTGGCGCAGTGGAGCCAGGCACAGCTGAGCGAC
GGGGAGCTGGGCCGCGAGGTGGACGCCTGGCTGCGCCGCGCCCAGGACAAGTACCCCGCGGCGCGCCTGC
GCCAGGAGCTGCAGCGCGTGTGGCGCGGGCACACGGACGAGGTGTTGGGGCTGGCCCGGGCCCTGGTGGC
CCAGGGACGGCCGGCGCTGGTGCGGCTGCTCTTCGAGACCATGGAGCGCGAGGGCGAGGGCGCCAGCGCG
CCGCGGGACCGCCGGGCTGTCTCATTCTAG

Translation (569 aa):
MAELEAVADDLDALIDDLDYLPGHFHLEMQLNFEPRSPAPQRARDLKLQREGLRQELQLAAAPQRPAVRH
LLGAFAFYLEELDEARECFLEVAHEHPGNLNAWANLAHVYGRLGQEEEEEACAARLADLMGLAEEPEAAG
DPQLRAARCLAEQGYAHGFDVGCASPEERARGLAAGIALYDKALGYGQQIPMEEKRGWYFTMATLYIRLD
GIFLELGSEEQKRLPAFNRTLALLRQVLKSEDPRHRALAWCYLGMLLERKDTFSTTPMGVHDCGYSGTDP
LDCFGKAIEIAKNQPPILNRLAKIFYFLGKQDMAIGTCNMALDVLRDPELNWQAYCTRAKIHIRAYLHDL
KRAKMGLGGMPDRNHLACAKADLEEVVRVCPGFKAYLDIGQVYYYMGVDAVQELLAVDEAALNQALVFLA
KAGESELGATLPELQLLRGKCLRIKGEDANAAACFKRAVELDDAGSSHTDGFGCLLEALLAQWSQAQLSD
GELGREVDAWLRRAQDKYPAARLRQELQRVWRGHTDEVLGLARALVAQGRPALVRLLFETMEREGEGASA
PRDRRAVSF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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