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Report for CCDS35337.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35337.1 Public Homo sapiens X NEXMIF 24 110 108 CCDS HistoryNCBI Gene:340533Re-query CCDS DB by CCDS ID:35337.1Re-query CCDS DB by GeneID:340533See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35337.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000055682.12 ENSP00000055682.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000055682.12Link to Ensembl Protein Viewer:ENSP00000055682.5Re-query CCDS DB by Nucleotide ID:ENST00000055682Re-query CCDS DB by Protein ID:ENSP00000055682
Original member Current member EBI ENST00000616200.2 ENSP00000480284.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616200.2Link to Ensembl Protein Viewer:ENSP00000480284.1Re-query CCDS DB by Nucleotide ID:ENST00000616200Re-query CCDS DB by Protein ID:ENSP00000480284
Original member Current member NCBI NM_001008537.3 NP_001008537.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001008537.3Link to Protein Sequence:NP_001008537.1Re-query CCDS DB by Nucleotide ID:NM_001008537Re-query CCDS DB by Protein ID:NP_001008537Link to BLAST:NP_001008537.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008537.1 1516 Q5QGS0 1516 100% 0 0

Chromosomal Locations for CCDS 35337.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 74739405 74739498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74740100 74744477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74745572 74745650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4551 nt):
ATGGATAACCAACAAGATAAGGCTATTGTTGCCTCAGCCAACGGAGAAAACACTCTGATTAATGGGGTCA
AAGAAAATGACTCAGAGGACCAGGATGTGGCAATGAAGTCATTTGCAGCTCTAGAAGCTGCTGCACCTAT
CCAGCCTACACCGGTGGCACAAAAAGAGACCCTGATGTATCCCAGAGGTCTCCTGCCTCTACCCTCTAAG
AAGCCCTGTATGCAGAGCCCGCCCTCTCCTTTGGGCCTGATTGAAGCACCCGAACATGCTGCTAATAGTG
CTTCTGTGAATGCCATCTCCCTCACATCTGGCATTGCAAAAGGCCTGAACACATGGTCACTTCCCAATGA
ATGTGAGAAAGCTCCATTTGCCATAATGGAGCCTGCAGGCATGTCAGCTCTGAATGGGGACTGTCTCATG
CAGCCAAGTCGGACTTGCTTAGGCTGCTTCATGGAATCCAAGGATGCAGTAGATCCTGAGCCAGGGATCA
GTCTGAAAGTTGGTGATCTAAATAGGGATTATGAAACGTGTGCAGTCTCTGATATAGGGATTCAGTGTAT
TAATGCTGGAGAAAATATGAAATATGGAGAGCAGCTGCTCTCAGACCAGCTCCTAGGCTTCCCCCTGCAT
AAGTCAAGGGCAGGAGACAGACGAGAAACTGAGAAACCTGACATTGACTTGGAGGATCCGGCTCAGAAAA
GCTATTATGAGGCATTACTGTTAGACAAGTGCAATACAGAAGAAGCTTTGCTTGCAAATTCCAATCAGGA
TTGGGGTTACTTCGAGACTTTTATTAGTGAAAGTAAGATTGAACTGCTTGACCTCTGTTCCAAAAATGAG
CTGTCTGTCAACCTATTCTCTGAAGAAGATGTGGATAACTACATGTTTGATGATGATGAATCAACACTAG
GCAGTGATGTCTGCTCCCTGAAAATTCGATATGAATCCTTTCAGGACAATGTTCGAGACAAGACTACTCT
TTTGATGCAGGAAGATGCCCAATTCAACTTTTTTCCCAGCGTCTTTACTACCTGCCCCAAGCGAGAGTCT
AAGAGTGGGGCCCTGAAGCAGAGCAGTGATTTTTCCCAATTCAAGGTCCCTGATGTGAGCATCATCTGGG
GGGAGGAAGATAAAAACTTGGACAAGAAGAAAGGCAAAGAGGAAGGACAGGAAGACAAAGGTGTAGAGAA
GAAAGATGGAAAGGATAATGGAGAAAAGCCTGCCTTAAATAAACCATGCAGTGGGACTGAAGTAGAGCAA
CTTAAGAATCCAAAGCAGGGCCATCTTGCTAATTCCCTGGAGACATCAGGGAGTTTCAGTGATGATAGTT
CCTTCATTGAGATCTCATATGATGCTATGGGTGAGATCAAGGACTGTAGTCGCTATATGGCTCGGGACAC
TAATTCTGGCAGCTCCTCCTCCCAACAGAACTATGGGCTGCGAGCCAAGAGAAAAGTCAGATACAGTGAA
GATTATCTATATGATGTTGACTCACTAGAGGGTGAAAAAGTAAATGAGAGGAAGGAATGGCTGCCAGTTG
GTTCCAAAGAGGAAGATGATGATGAATGGTGTCCCAAAAAGAGAAGAAAAGTAACCCGTAAGGAGCCCCC
TGTTATTATCAAATATATCATCATTAATCGCTTTAAAGGTGAGAAGAACATGCTGGTGAAGTTGGGTAAG
GTGGATGCCAGTGAGACAACAGTGAATTTGAGTGAGAATCAGCTCAACAAATATGCCAAGCTGGCACCCT
TGAAAGGCTTCTGGCAAAAGAAGAAGAAGCAGAGAAACACCAACACGGACTCCATCAAGACACCTTTTTC
CCAAAAGCAAAGCTTTGAACCAGGTAGCTTTGAGGTGTCATTTCTGCCACCTGCTCGCAAACGAAAATCT
AAACTTGGCAACAGGCACAGGATTCAAAGAATCCCATCCATTGAAATTTCAGCAAGTAGTAAACAGATTT
CATTATGTAATGATCAGAGGCACGCTAGTAATCATAAAGAAGATGGAGGCCTAAAAGGTACACTGAAGTC
AGCACCTCTGGGTGCTCCTAGCTGTGCAAATGGATCACATTTAAATGACATCACAGGCCCTGACTCAGTG
AAAGTCAAAGCCCAAGACACAGAGTTTAAGGGGCCAGAGAGGAAAGTGCTCAATAAAATCAAATTTAAAA
GTGAAGCTAGGTTAAAATCTAAGAAAGTCAAAGCTGCTGGGCAAGAAAGCAAGCCAATTGTTCAAATGAG
CCCTCTCTTGGAAAACCAATCCTCAAAGGCTAATTTAAAGAATGAAGTTATTCCTGGGACATCAAACAGT
TCCCGTCTATCTGAATTTCATGAGGCAAAGGCTGCTAAGAGTTCCACTTTTCTACCAACGACATGCTCTT
CTGAAATGCCTTTATCATCTGCTAATGTTACCACTAATATACCTGTTATCCCGGGAGGGTATCTGCAGAC
ATTGTTAGATGCTTCTGACTTGTCAAATAACACTAGTATCTCATACTTCAGCCACCATTCTCCAGAGCAA
AATGAAGGCAGCCTCACTCAAACCGAAAAATCATTTGTACCCCTCCAGCCTACCCAGGACTGTGTGCTCA
CCTCATCCTCTGACTCTGAGCTGCAGCAGTCATCTCATAACTTCAAAATGGAATCAAGCAACTATAGAAA
TGTGTGGCCCAACAAGGCTACTTCTGGCACCCAGGAATTCATGGCTGAAGTCTCAAGGGAGATAGCCCCA
ACCCAATCCAGTGAATTTGGAGCCTCCCAAGTAGTCTCCATGGAAAATAACCTCACACCTACAACATACA
ATCCAATCTGTCTCAATAGTGGTGGCAGTAATTGCAACAAGGTCCTGTATGACTCCATGCAAGATACCCA
ACTCCCATCTGATGACTCTTACCAATTATGTCACTTTAATAATGGAGAGATCTGCTTTCCTTTCCAGCAG
GGGCCAGTCAATATGGATGATGGTCGGCTCTTTAGCTTTGATTCAATGGCCCCACTCTCTGTCAGCTCAA
GTAATTATTGCTCCTTAAGCTTGAAGTCCTGTGAAAAGGATGGCGATGATGATATCACTGATGACTTCCT
GGCCCATTGCAGCCCTAAGCTGGTGATCCAGCAAAGCATTGATGAGATAGCACCACTAAAGGAGTCCACT
GACCTCCTGGATATATCCAACTTCACCCCTGACAAATTCCGCCACTCTTCCCTTTCAGAGATGTCCCCAC
CGGACACCCCTAGTCTTTCCCCTCAAATTACCAGATGTGAGAGTATGAAGACACTAGGAACACTAAAGGG
GTTCCAAGAGGGTGTCCCAGGACCATTGGACAGTGTGGAAAAAATCAAGTGGGACTGCAGTACCCTTTCA
CGGCAGGTCCAAATGGAGGATGGATTTACTTTAAATAATCACCAGTTTCAGTTCCATATGTTCAATGATG
AGGATTCTGTCAGCCTGCTCCAAAAAAACCCTTGCCTGTCAACATTTAATGATCCATCTGGTCAAATTAG
TACCAACAACAAAGTGTCAAAATCAAGAAAGAAAAGTTCACCCAGCAAGAGTGGGGCTATGAACCAAAGC
TCTTCTCAGAAAAACACCAGGAAAAAATCCCTCAAAGGTAACAACAAGGGGATTGAAAAACCACCTGGCA
AAAACTCCCGCCAGGTCCCTAAGTCCACAAAGAAAGGGAAATACATGGCTGCCATCAATGGAGAGAAAAT
GCAAATTGGCATTGGCCGTGGGGGAAGCCAAACCAACACCATATCCTCCACTGGGAAGACATTGGCTGAA
TGTATCCAACATGGTGGCCCTATGGCCTCTATGAAGATGCCAAGTCAAAAGGGACTTTCTGGAGATTGGG
CCTTGGGGAAGGAGAGCAGCCCAGGCTGGAGTGATATGAGCATGGGCACCAACACCAACAGCCTTCTGGA
TGATGACCAACGGGAATTTCAGGAGCCTTCCTATATCTTGTCCAACATTGCCTCTGGTATGGCAGATGTG
CAGAGATTCATGATGGCCTCCATAGAGCCCCTTTGGGAACCCATGGAGCACCATGGGGATCCCAACATAT
TCTACTCCCCTGAGTCCAATAGTCTAAAATTAAAAACCCTCAAAATATTGGCTGGGACACCACAGGAGTC
TAAGAAAAAGATCAACAGTGGGTCCCAAGGAGCCACTAAGAATCACAGGTCAATCAAGGGTGTGAGCAAA
AGCAATGGGAAAACAGCAATAGGTGATCCTGGTCGTGCAAACATGCCTGGTTATAACGAGGACTCTCGCT
CTACCTTCTTTGATAAAAAGTATAGTAACATGAGCACTTTAGGCAATAACGGACCGACACACAAAAAGTT
GTATCGTCACAAATCCAGCTCCAAGGCCCTGAGAGATGAGAAATGTAAGGGAAAGCACATGGAGCGAGAA
CAGGTCCACAAGGATGAGTCTGGGACAGCTTCTTTTGAAAAACTGAGGGATTCCGACTACAATCTCCTAA
AAGCAGAAACAACCTTTTGGGTTTTACCTGTGTTTGAAGAAGAGACTCGCATTTTCCAGAAAGACATTTG
A

Translation (1516 aa):
MDNQQDKAIVASANGENTLINGVKENDSEDQDVAMKSFAALEAAAPIQPTPVAQKETLMYPRGLLPLPSK
KPCMQSPPSPLGLIEAPEHAANSASVNAISLTSGIAKGLNTWSLPNECEKAPFAIMEPAGMSALNGDCLM
QPSRTCLGCFMESKDAVDPEPGISLKVGDLNRDYETCAVSDIGIQCINAGENMKYGEQLLSDQLLGFPLH
KSRAGDRRETEKPDIDLEDPAQKSYYEALLLDKCNTEEALLANSNQDWGYFETFISESKIELLDLCSKNE
LSVNLFSEEDVDNYMFDDDESTLGSDVCSLKIRYESFQDNVRDKTTLLMQEDAQFNFFPSVFTTCPKRES
KSGALKQSSDFSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKDGKDNGEKPALNKPCSGTEVEQ
LKNPKQGHLANSLETSGSFSDDSSFIEISYDAMGEIKDCSRYMARDTNSGSSSSQQNYGLRAKRKVRYSE
DYLYDVDSLEGEKVNERKEWLPVGSKEEDDDEWCPKKRRKVTRKEPPVIIKYIIINRFKGEKNMLVKLGK
VDASETTVNLSENQLNKYAKLAPLKGFWQKKKKQRNTNTDSIKTPFSQKQSFEPGSFEVSFLPPARKRKS
KLGNRHRIQRIPSIEISASSKQISLCNDQRHASNHKEDGGLKGTLKSAPLGAPSCANGSHLNDITGPDSV
KVKAQDTEFKGPERKVLNKIKFKSEARLKSKKVKAAGQESKPIVQMSPLLENQSSKANLKNEVIPGTSNS
SRLSEFHEAKAAKSSTFLPTTCSSEMPLSSANVTTNIPVIPGGYLQTLLDASDLSNNTSISYFSHHSPEQ
NEGSLTQTEKSFVPLQPTQDCVLTSSSDSELQQSSHNFKMESSNYRNVWPNKATSGTQEFMAEVSREIAP
TQSSEFGASQVVSMENNLTPTTYNPICLNSGGSNCNKVLYDSMQDTQLPSDDSYQLCHFNNGEICFPFQQ
GPVNMDDGRLFSFDSMAPLSVSSSNYCSLSLKSCEKDGDDDITDDFLAHCSPKLVIQQSIDEIAPLKEST
DLLDISNFTPDKFRHSSLSEMSPPDTPSLSPQITRCESMKTLGTLKGFQEGVPGPLDSVEKIKWDCSTLS
RQVQMEDGFTLNNHQFQFHMFNDEDSVSLLQKNPCLSTFNDPSGQISTNNKVSKSRKKSSPSKSGAMNQS
SSQKNTRKKSLKGNNKGIEKPPGKNSRQVPKSTKKGKYMAAINGEKMQIGIGRGGSQTNTISSTGKTLAE
CIQHGGPMASMKMPSQKGLSGDWALGKESSPGWSDMSMGTNTNSLLDDDQREFQEPSYILSNIASGMADV
QRFMMASIEPLWEPMEHHGDPNIFYSPESNSLKLKTLKILAGTPQESKKKINSGSQGATKNHRSIKGVSK
SNGKTAIGDPGRANMPGYNEDSRSTFFDKKYSNMSTLGNNGPTHKKLYRHKSSSKALRDEKCKGKHMERE
QVHKDESGTASFEKLRDSDYNLLKAETTFWVLPVFEEETRIFQKDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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