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Report for CCDS6346.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6346.2 Public Homo sapiens 8 FAM91A1 24 110 108 CCDS HistoryNCBI Gene:157769Re-query CCDS DB by CCDS ID:6346.2Re-query CCDS DB by GeneID:157769See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6346.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334705.12 ENSP00000335082.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334705.12Link to Ensembl Protein Viewer:ENSP00000335082.7Re-query CCDS DB by Nucleotide ID:ENST00000334705Re-query CCDS DB by Protein ID:ENSP00000335082
Original member Current member NCBI NM_144963.4 NP_659400.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144963.4Link to Protein Sequence:NP_659400.3Re-query CCDS DB by Nucleotide ID:NM_144963Re-query CCDS DB by Protein ID:NP_659400Link to BLAST:NP_659400.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659400.3 838 Q658Y4 838 100% 0 0

Chromosomal Locations for CCDS 6346.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 123768703 123768774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123774080 123774164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123775147 123775298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123777265 123777322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123778025 123778092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123778659 123778772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123779985 123780075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123780480 123780542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123784470 123784576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123785081 123785119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123785629 123785741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123786495 123786610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123787261 123787373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123787664 123787750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123789613 123789745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123798090 123798238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123799520 123799654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123799772 123799885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123805267 123805339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123806080 123806229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123808272 123808376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123808893 123809016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123810282 123810351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123812519 123812704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2517 nt):
ATGAACATAGACGTGGAGTTCCACATCCGGCACAACTACCCCTGGAACAAGTTGCCGGCCAACGTGAGAC
AGAGTCTTGGAAATTCACAGAGAGAATATGAAAAGCAGGTTGTCCTGTACAGTATCCGCAATCAGTTACG
ATATAGAAATAACTTAGTTAAACATGTCAAGAAAGATGAACGCAGATACTATGAGGAACTGCTAAAGTAC
AGCCGAGATCATCTCATGCTGTACCCTTACCATCTATCGGATATTATGGTGAAAGGCTTGAGGATAACAC
CATTTTCATATTATACTGGGATTATGGAGGATATTATGAACAGTGAGAAAAGTTATGATTCATTGCCCAA
TTTTACTGCTGCTGACTGTCTAAGGCTTCTTGGCATAGGAAGAAACCAGTATATTGATCTTATGAATCAG
TGTAGATCATCAAAAAAATTCTTCAGAAGGAAAACAGCCCGTGATCTTCTACCAATAAAGCCAGTGGAAA
TTGCCATAGAGGCGTGGTGGGTGGTGCAGGCTGGCTATATCACAGAAGATGACATCAAGATATGCACTTT
GCCTGAGAAATGCGCTGTTGATAAGATCATCGATTCAGGCCCTCAACTCTCTGGATCACTAGATTACAAT
GTAGTACATAGTTTGTATAACAAAGGATTTATTTATCTGGATGTACCAATATCTGATGACAGTTGTATAG
CAGTTCCACCTCTTGAAGGTTTTGTAATGAATCGAGTGCAAGGTGATTATTTTGAAACTCTACTCTATAA
GATATTTGTTTCAATAGATGAGCACACAAATGTTGCAGAGCTTGCAAATGTCCTTGAGATTGACTTATCC
CTGGTTAAGAATGCTGTTTCAATGTATTGCCGATTGGGCTTTGCCCATAAGAAGGGACAAGTAATTAATT
TGGATCAACTTCATTCATCATGGAAGAATGTTCCATCCGTAAACAGATTAAAGAGTACCTTAGATCCACA
GAAGATGCTCTTGTCATGGGATGGAGGGGAAAGTAGGAGTCCTGTACAAGAAGCTTCATCGGCAACTGAC
ACTGATACAAATAGTCAAGAAGATCCAGCTGACACAGCCAGTGTAAGCAGCCTGAGTCTGTCTACAGGAC
ACACGAAGCGCATCGCATTCCTGTTTGACTCCACTCTTACTGCCTTCTTAATGATGGGAAATCTTTCACC
AAACTTGAAAAGTCATGCAGTCACAATGTTTGAAGTAGGCAAACTCTCAGATGAGTCTCTGGACAGCTTT
CTTATAGAACTAGAAAAGGTTCAGAGCACTGGTGAAGGAGAAGCACAGAGATATTTTGATCATGCACTTA
CTCTGAGAAACACAATACTGTTTCTGCGTCATAACAAAGATCTAGTTGCGCAAACTGCACAGCCAGACCA
ACCCAATTATGGTTTTCCTCTGGATCTCTTACGCTGTGAAAGCCTTCTTGGTTTGGACCCTGCAACTTGC
AGCAGAGTTCTAAACAAAAATTACACGCTGCTTGTTTCCATGGCTCCCCTCACCAATGAAATCCGGCCTG
TCAGCAGCTGCACCCCTCAGCATATTGGACCAGCTATCCCAGAAGTCAGCTCTGTCTGGTTTAAACTGTA
CATTTATCATGTCACTGGACAAGGACCACCATCCCTTTTATTGTCCAAAGGTACAAGACTTCGAAAACTG
CCAGATATATTTCAGAGTTATGATCGATTGCTAATAACATCTTGGGGTCATGATCCTGGAGTAGTTCCTA
CCTCAAATGTGCTCACGATGTTGAATGATGCTTTAACACATTCTGCAGTTTTAATTCAGGGGCATGGTCT
GCATGGGATAGGAGAAACTGTCCATGTCCCATTTCCATTTGATGAAACAGAACTACAAGGAGAGTTCACT
CGTGTCAATATGGGTGTTCATAAAGCATTGCAGATACTAAGGAACAGAGTGGACTTACAGCATCTCTGTG
GATATGTCACCATGTTGAATGCTTCCAGCCAACTTGCAGATAGAAAACTCAGTGATGCTTCTGATGAGAG
AGGAGAACCTGATTTGGCTTCTGGCTCAGATGTAAATGGGAGTACAGAGTCATTTGAAATGGTCATTGAG
GAAGCAACTATAGATTCAGCAACAAAGCAAACCTCTGGTGCCACAACAGAAGCAGATTGGGTTCCTCTCG
AGCTGTGCTTTGGAATTCCACTGTTCAGTTCCGAATTAAACCGGAAAGTTTGTAGGAAAATTGCTGCACA
TGGCCTTTGCAGAAAAGAGAGCCTTCAAAACCTCTTACATTCCAGTAGAAAACTCTCTCTGCAAGTCCTT
AACTTTGTTCACTCATTCCAGGAAGGTGCTTCAATATTGGATATTCACACAGAGCCCAGTTTTTCAAGTT
TGCTTTCACAGTCATCGTGTGCTGACATGGGTGTTCCACTTCCTGCAAAAAACTTAATATTTAAAGATGG
TGTCTTATCAGAATGGAGTGGACGGTCACCTTCCTCACTTCTTATTGCTAATCTCCATTTGCAATAA

Translation (838 aa):
MNIDVEFHIRHNYPWNKLPANVRQSLGNSQREYEKQVVLYSIRNQLRYRNNLVKHVKKDERRYYEELLKY
SRDHLMLYPYHLSDIMVKGLRITPFSYYTGIMEDIMNSEKSYDSLPNFTAADCLRLLGIGRNQYIDLMNQ
CRSSKKFFRRKTARDLLPIKPVEIAIEAWWVVQAGYITEDDIKICTLPEKCAVDKIIDSGPQLSGSLDYN
VVHSLYNKGFIYLDVPISDDSCIAVPPLEGFVMNRVQGDYFETLLYKIFVSIDEHTNVAELANVLEIDLS
LVKNAVSMYCRLGFAHKKGQVINLDQLHSSWKNVPSVNRLKSTLDPQKMLLSWDGGESRSPVQEASSATD
TDTNSQEDPADTASVSSLSLSTGHTKRIAFLFDSTLTAFLMMGNLSPNLKSHAVTMFEVGKLSDESLDSF
LIELEKVQSTGEGEAQRYFDHALTLRNTILFLRHNKDLVAQTAQPDQPNYGFPLDLLRCESLLGLDPATC
SRVLNKNYTLLVSMAPLTNEIRPVSSCTPQHIGPAIPEVSSVWFKLYIYHVTGQGPPSLLLSKGTRLRKL
PDIFQSYDRLLITSWGHDPGVVPTSNVLTMLNDALTHSAVLIQGHGLHGIGETVHVPFPFDETELQGEFT
RVNMGVHKALQILRNRVDLQHLCGYVTMLNASSQLADRKLSDASDERGEPDLASGSDVNGSTESFEMVIE
EATIDSATKQTSGATTEADWVPLELCFGIPLFSSELNRKVCRKIAAHGLCRKESLQNLLHSSRKLSLQVL
NFVHSFQEGASILDIHTEPSFSSLLSQSSCADMGVPLPAKNLIFKDGVLSEWSGRSPSSLLIANLHLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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