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Report for CCDS13136.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13136.1 Public Homo sapiens 20 RBBP9 24 110 108 CCDS HistoryNCBI Gene:10741Re-query CCDS DB by CCDS ID:13136.1Re-query CCDS DB by GeneID:10741See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13136.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337227.9 ENSP00000336866.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337227.9Link to Ensembl Protein Viewer:ENSP00000336866.4Re-query CCDS DB by Nucleotide ID:ENST00000337227Re-query CCDS DB by Protein ID:ENSP00000336866
Original member Current member NCBI NM_006606.3 NP_006597.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006606.3Link to Protein Sequence:NP_006597.2Re-query CCDS DB by Nucleotide ID:NM_006606Re-query CCDS DB by Protein ID:NP_006597Link to BLAST:NP_006597.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006597.2 186 O75884-1 186 100% 0 0

Chromosomal Locations for CCDS 13136.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 18489764 18489990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18490395 18490480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18493958 18494063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18495838 18495880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18497069 18497167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (561 nt):
ATGGCTTCTCCTAGCAAGGCAGTGATTGTTCCCGGGAACGGAGGCGGGGATGTGACCACCCACGGCTGGT
ATGGCTGGGTGAAAAAGGAGCTGGAGAAGATACCTGGTTTCCAGTGTTTGGCTAAAAACATGCCCGACCC
AATTACAGCACGAGAGAGCATCTGGCTGCCCTTCATGGAGACAGAGCTGCACTGTGATGAGAAGACTATC
ATCATTGGCCACAGTTCTGGGGCCATCGCGGCCATGAGGTATGCAGAAACACATCGAGTATATGCTATTG
TATTAGTGTCTGCGTACACATCAGACTTGGGGGATGAAAATGAGCGTGCAAGTGGATACTTCACCCGCCC
CTGGCAGTGGGAGAAGATCAAGGCCAACTGCCCTTACATTGTGCAGTTTGGCTCTACTGACGACCCGTTC
CTTCCCTGGAAGGAACAACAAGAAGTGGCCGATAGGTTGGAAACCAAATTGCACAAATTCACTGACTGTG
GCCACTTTCAGAACACAGAGTTTCATGAACTGATTACTGTTGTAAAGTCTTTGCTGAAAGTACCAGCATA
G

Translation (186 aa):
MASPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITARESIWLPFMETELHCDEKTI
IIGHSSGAIAAMRYAETHRVYAIVLVSAYTSDLGDENERASGYFTRPWQWEKIKANCPYIVQFGSTDDPF
LPWKEQQEVADRLETKLHKFTDCGHFQNTEFHELITVVKSLLKVPA


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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