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Report for CCDS14408.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14408.1 Public Homo sapiens X GJB1 24 110 108 CCDS HistoryNCBI Gene:2705Re-query CCDS DB by CCDS ID:14408.1Re-query CCDS DB by GeneID:2705See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14408.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361726.7 ENSP00000354900.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361726.7Link to Ensembl Protein Viewer:ENSP00000354900.6Re-query CCDS DB by Nucleotide ID:ENST00000361726Re-query CCDS DB by Protein ID:ENSP00000354900
Original member Current member EBI ENST00000374029.2 ENSP00000363141.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374029.2Link to Ensembl Protein Viewer:ENSP00000363141.1Re-query CCDS DB by Nucleotide ID:ENST00000374029Re-query CCDS DB by Protein ID:ENSP00000363141
Original member Current member EBI ENST00000447581.2 ENSP00000407223.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000447581.2Link to Ensembl Protein Viewer:ENSP00000407223.2Re-query CCDS DB by Nucleotide ID:ENST00000447581Re-query CCDS DB by Protein ID:ENSP00000407223
Original member Current member EBI ENST00000645009.2 ENSP00000494142.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645009.2Link to Ensembl Protein Viewer:ENSP00000494142.2Re-query CCDS DB by Nucleotide ID:ENST00000645009Re-query CCDS DB by Protein ID:ENSP00000494142
Original member Current member EBI ENST00000646835.1 ENSP00000494596.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646835.1Link to Ensembl Protein Viewer:ENSP00000494596.1Re-query CCDS DB by Nucleotide ID:ENST00000646835Re-query CCDS DB by Protein ID:ENSP00000494596
Original member Current member EBI ENST00000647424.1 ENSP00000495960.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000647424.1Link to Ensembl Protein Viewer:ENSP00000495960.1Re-query CCDS DB by Nucleotide ID:ENST00000647424Re-query CCDS DB by Protein ID:ENSP00000495960
Original member Current member EBI ENST00000675609.1 ENSP00000501571.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675609.1Link to Ensembl Protein Viewer:ENSP00000501571.1Re-query CCDS DB by Nucleotide ID:ENST00000675609Re-query CCDS DB by Protein ID:ENSP00000501571
Original member Current member EBI ENST00000675368.1 ENSP00000501757.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675368.1Link to Ensembl Protein Viewer:ENSP00000501757.1Re-query CCDS DB by Nucleotide ID:ENST00000675368Re-query CCDS DB by Protein ID:ENSP00000501757
Original member Current member EBI ENST00000675209.1 ENSP00000501813.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675209.1Link to Ensembl Protein Viewer:ENSP00000501813.1Re-query CCDS DB by Nucleotide ID:ENST00000675209Re-query CCDS DB by Protein ID:ENSP00000501813
Original member Current member EBI ENST00000674844.1 ENSP00000502556.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674844.1Link to Ensembl Protein Viewer:ENSP00000502556.1Re-query CCDS DB by Nucleotide ID:ENST00000674844Re-query CCDS DB by Protein ID:ENSP00000502556
Original member Current member EBI ENST00000674549.1 ENSP00000502766.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674549.1Link to Ensembl Protein Viewer:ENSP00000502766.1Re-query CCDS DB by Nucleotide ID:ENST00000674549Re-query CCDS DB by Protein ID:ENSP00000502766
Original member Current member NCBI NM_000166.6 NP_000157.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000166.6Link to Protein Sequence:NP_000157.1Re-query CCDS DB by Nucleotide ID:NM_000166Re-query CCDS DB by Protein ID:NP_000157Link to BLAST:NP_000157.1
Original member Current member NCBI NM_001097642.3 NP_001091111.1 Accepted alive Link to Nucleotide Sequence:NM_001097642.3Link to Protein Sequence:NP_001091111.1Re-query CCDS DB by Nucleotide ID:NM_001097642Re-query CCDS DB by Protein ID:NP_001091111Link to BLAST:NP_001091111.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000157.1 283 P08034 283 100% 0 0
NP_001091111.1 283 P08034 283 100% 0 0

Chromosomal Locations for CCDS 14408.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 71223708 71224559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGAACTGGACAGGTTTGTACACCTTGCTCAGTGGCGTGAACCGGCATTCTACTGCCATTGGCCGAGTAT
GGCTCTCGGTCATCTTCATCTTCAGAATCATGGTGCTGGTGGTGGCTGCAGAGAGTGTGTGGGGTGATGA
GAAATCTTCCTTCATCTGCAACACACTCCAGCCTGGCTGCAACAGCGTTTGCTATGACCAATTCTTCCCC
ATCTCCCATGTGCGGCTGTGGTCCCTGCAGCTCATCCTAGTTTCCACCCCAGCTCTCCTCGTGGCCATGC
ACGTGGCTCACCAGCAACACATAGAGAAGAAAATGCTACGGCTTGAGGGCCATGGGGACCCCCTACACCT
GGAGGAGGTGAAGAGGCACAAGGTCCACATCTCAGGGACACTGTGGTGGACCTATGTCATCAGCGTGGTG
TTCCGGCTGTTGTTTGAGGCCGTCTTCATGTATGTCTTTTATCTGCTCTACCCTGGCTATGCCATGGTGC
GGCTGGTCAAGTGCGACGTCTACCCCTGCCCCAACACAGTGGACTGCTTCGTGTCCCGCCCCACCGAGAA
AACCGTCTTCACCGTCTTCATGCTAGCTGCCTCTGGCATCTGCATCATCCTCAATGTGGCCGAGGTGGTG
TACCTCATCATCCGGGCCTGTGCCCGCCGAGCCCAGCGCCGCTCCAATCCACCTTCCCGCAAGGGCTCGG
GCTTCGGCCACCGCCTCTCACCTGAATACAAGCAGAATGAGATCAACAAGCTGCTGAGTGAGCAGGATGG
CTCCCTGAAAGACATACTGCGCCGCAGCCCTGGCACCGGGGCTGGGCTGGCTGAAAAGAGCGACCGCTGC
TCGGCCTGCTGA

Translation (283 aa):
MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGCNSVCYDQFFP
ISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEVKRHKVHISGTLWWTYVISVV
FRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCFVSRPTEKTVFTVFMLAASGICIILNVAEVV
YLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRC
SAC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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