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Report for CCDS37724.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37724.1 Public Mus musculus 18 Kif5b 23 108 98 CCDS HistoryNCBI Gene:16573Re-query CCDS DB by CCDS ID:37724.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37724.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025083.13 ENSMUSP00000025083.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025083.13Link to Ensembl Protein Viewer:ENSMUSP00000025083.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000025083Re-query CCDS DB by Protein ID:ENSMUSP00000025083
Original member Current member NCBI NM_008448.3 NP_032474.2 Accepted alive Link to Nucleotide Sequence:NM_008448.3Link to Protein Sequence:NP_032474.2Re-query CCDS DB by Nucleotide ID:NM_008448Re-query CCDS DB by Protein ID:NP_032474Link to BLAST:NP_032474.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032474.2 963 Q61768 963 100% 0 0

Chromosomal Locations for CCDS 37724.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 6208205 6208335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6209000 6209216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6210700 6210804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6211024 6211095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6211192 6211252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6212517 6212618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6213187 6213296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6213393 6213454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6213970 6214087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6214512 6214700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6216223 6216366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6216741 6216947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6220224 6220292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6220802 6220995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6222719 6222867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6223546 6223691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6223971 6224075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6225318 6225442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6225597 6225684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6225768 6225823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6226382 6226430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6226864 6226968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6227588 6227661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6234815 6234902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6240982 6241107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2892 nt):
ATGGCGGACCCGGCGGAGTGCAACATCAAAGTGATGTGTCGCTTCAGACCTCTCAACGAATCTGAAGTGA
ACCGCGGCGATAAGTACGTCGCCAAATTCCAGGGAGAAGACACGGTGATGATCGCGTCCAAGCCTTATGC
CTTTGATCGTGTGTTCCAGTCAAGCACATCTCAAGAGCAAGTATACAACGACTGTGCAAAAAAGATTGTT
AAAGATGTTCTTGAGGGCTATAATGGAACAATATTTGCATATGGACAAACATCATCTGGGAAGACCCACA
CGATGGAGGGTAAACTTCATGATCCAGAAGGCATGGGAATTATTCCAAGAATAGTGCAAGATATTTTTAA
TTATATTTACTCCATGGATGAAAATTTGGAATTTCATATTAAGGTTTCATATTTTGAAATATATTTGGAT
AAGATAAGGGACTTGTTAGATGTTTCAAAGACTAACCTTTCAGTCCATGAAGACAAAAACCGTGTTCCCT
ATGTAAAGGGGTGCACAGAACGTTTCGTGTGTAGTCCAGATGAAGTCATGGATACCATAGATGAAGGGAA
ATCCAACAGACATGTCGCAGTTACAAATATGAATGAACATAGCTCTAGGAGTCACAGCATATTTCTTATT
AATGTAAAACAAGAGAATACACAAACGGAACAGAAACTCAGTGGAAAGCTTTATCTGGTTGATTTAGCTG
GCAGTGAGAAGGTTAGTAAGACTGGGGCTGAAGGTGCTGTGCTGGATGAAGCTAAGAACATCAACAAGTC
ACTTTCTGCACTTGGAAATGTCATTTCTGCTTTGGCAGAGGGCAGTACCTATGTTCCTTATCGAGATAGT
AAAATGACCAGAATTCTTCAAGATTCATTAGGTGGCAACTGTAGGACCACTATTGTCATATGCTGCTCTC
CATCATCATACAATGAGTCTGAGACAAAGTCAACACTCCTCTTTGGTCAAAGGGCCAAAACAATTAAGAA
CACAGTCTGTGTCAATGTAGAGTTAACTGCGGAGCAGTGGAAAAAGAAGTATGAAAAAGAAAAGGAAAAA
AATAAAACTCTACGGAACACTATTCAGTGGCTGGAAAACGAGCTAAACCGTTGGCGTAACGGGGAGACAG
TGCCTATTGATGAGCAGTTTGACAAAGAGAAAGCTAATTTGGAAGCCTTCACAGCGGATAAAGATATTGC
TATTACCAGTGATAAACCAGCTGCTGCAGTCGGAATGGCTGGTAGTTTTACCGATGCTGAAAGAAGAAAG
TGTGAAGAAGAACTTGCTAAATTGTATAAACAACTTGATGACAAGGATGAAGAGATTAACCAACAAAGCC
AATTGGTAGAGAAATTGAAGACACAAATGCTGGATCAGGAAGAGCTTCTGGCATCAACCAGAAGGGATCA
AGATAATATGCAAGCTGAACTGAATCGCCTCCAAGCAGAAAATGATGCTTCTAAAGAAGAAGTCAAAGAA
GTTTTACAGGCCTTAGAGGAACTGGCTGTTAATTATGATCAGAAGTCTCAGGAAGTTGAAGACAAAACAA
AGGAATATGAATTGCTTAGTGATGAATTGAATCAAAAATCTGCAACTTTAGCAAGTATTGATGCTGAGCT
TCAGAAGCTGAAGGAAATGACCAACCACCAGAAGAAACGAGCAGCTGAAATGATGGCATCATTATTAAAA
GACCTTGCAGAAATAGGAATTGCTGTGGGGAATAACGATGTGAAGCAACCAGAAGGAACTGGTATGATAG
ATGAAGAGTTTACTGTTGCAAGACTCTACATTAGCAAAATGAAATCAGAAGTAAAGACCATGGTGAAACG
CTGCAAACAGCTAGAAAGCACACAGACTGAGAGCAACAAAAAAATGGAAGAAAATGAGAAAGAGTTAGCA
GCATGCCAGCTTCGGATCTCCCAACATGAAGCCAAAATCAAGTCACTGACTGAGTACCTTCAGAATGTAG
AACAAAAGAAGAGGCAGCTGGAGGAGTCTGTTGATTCCCTTGGTGAGGAGCTAGTCCAACTCCGAGCACA
AGAGAAAGTCCATGAAATGGAAAAAGAGCACTTGAACAAGGTTCAGACTGCAAATGAAGTCAAGCAAGCT
GTTGAGCAGCAGATCCAGAGTCACAGAGAAACCCACCAAAAACAAATCAGTAGTTTGCGAGATGAAGTGG
AGGCAAAGGAAAAGCTAATCACTGACCTCCAAGACCAAAACCAGAAGATGGTGTTGGAGCAGGAACGGCT
AAGGGTGGAGCATGAGAGGCTGAAGGCTACAGACCAAGAGAAGAGCAGGAAGCTGCACGAGCTCACGGTT
ATGCAAGACAGACGAGAACAAGCAAGACAAGACTTGAAGGGTTTGGAGGAGACCGTGGCAAAAGAACTTC
AGACTTTACACAACCTGCGTAAGCTCTTTGTTCAGGACTTGGCTACCAGGGTGAAAAAGAGCGCCGAGGT
CGACTCTGACGACACTGGCGGCAGTGCTGCACAGAAGCAGAAAATCTCCTTCCTTGAAAACAACCTTGAA
CAGCTCACCAAAGTGCACAAGCAGTTGGTACGCGATAATGCAGATCTTCGCTGTGAGCTTCCTAAGTTAG
AGAAACGGCTTAGAGCTACTGCAGAAAGAGTGAAAGCTTTGGAGTCAGCCCTGAAAGAAGCCAAAGAAAA
TGCATCTCGAGACCGTAAACGCTATCAGCAAGAAGTAGACCGGATAAAGGAAGCAGTCAGGTCAAAGAAC
ATGGCCAGAAGGGGACATTCTGCCCAGATTGCAAAGCCGATCCGTCCTGGACAGCATCCAGCGGCCTCGC
CAACTCACCCGGGCACAGTTCGTGGAGGAGGCTCATTTGTTCAGAACAACCAGCCAGTGGGGCTTCGTGG
TGGTGGAGGCAAGCAGTCGTAA

Translation (963 aa):
MADPAECNIKVMCRFRPLNESEVNRGDKYVAKFQGEDTVMIASKPYAFDRVFQSSTSQEQVYNDCAKKIV
KDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLD
KIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLI
NVKQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDS
KMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTIKNTVCVNVELTAEQWKKKYEKEKEK
NKTLRNTIQWLENELNRWRNGETVPIDEQFDKEKANLEAFTADKDIAITSDKPAAAVGMAGSFTDAERRK
CEEELAKLYKQLDDKDEEINQQSQLVEKLKTQMLDQEELLASTRRDQDNMQAELNRLQAENDASKEEVKE
VLQALEELAVNYDQKSQEVEDKTKEYELLSDELNQKSATLASIDAELQKLKEMTNHQKKRAAEMMASLLK
DLAEIGIAVGNNDVKQPEGTGMIDEEFTVARLYISKMKSEVKTMVKRCKQLESTQTESNKKMEENEKELA
ACQLRISQHEAKIKSLTEYLQNVEQKKRQLEESVDSLGEELVQLRAQEKVHEMEKEHLNKVQTANEVKQA
VEQQIQSHRETHQKQISSLRDEVEAKEKLITDLQDQNQKMVLEQERLRVEHERLKATDQEKSRKLHELTV
MQDRREQARQDLKGLEETVAKELQTLHNLRKLFVQDLATRVKKSAEVDSDDTGGSAAQKQKISFLENNLE
QLTKVHKQLVRDNADLRCELPKLEKRLRATAERVKALESALKEAKENASRDRKRYQQEVDRIKEAVRSKN
MARRGHSAQIAKPIRPGQHPAASPTHPGTVRGGGSFVQNNQPVGLRGGGGKQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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