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Report for CCDS86938.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86938.1 Public Homo sapiens 20 DTD1 24 110 108 CCDS HistoryNCBI Gene:92675Re-query CCDS DB by CCDS ID:86938.1Re-query CCDS DB by GeneID:92675See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86938.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000494921.2 ENSP00000495845.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000494921.2Link to Ensembl Protein Viewer:ENSP00000495845.1Re-query CCDS DB by Nucleotide ID:ENST00000494921Re-query CCDS DB by Protein ID:ENSP00000495845
Original member Current member NCBI NM_001318043.2 NP_001304972.1 Accepted alive Link to Nucleotide Sequence:NM_001318043.2Link to Protein Sequence:NP_001304972.1Re-query CCDS DB by Nucleotide ID:NM_001318043Re-query CCDS DB by Protein ID:NP_001304972Link to BLAST:NP_001304972.1

Chromosomal Locations for CCDS 86938.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 18588073 18588115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18593731 18593821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18596006 18596241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18628127 18628233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18630381 18630545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGAAGGCCGTGGTGCAGCGCGTCACCCGGGCCAGCGTCACAGTTGGAGGAGAGCAGATTAGTGCCATTG
GAAGGGGCATATGTGTGTTGCTGGGTATTTCCCTGGAGGATACGCAGAAGGAACTGGAACACATGGTCCG
AAAGATTCTAAACCTGCGTGTATTTGAGGATGAGAGTGGGAAGCACTGGTCGAAGAGTGTGATGGACAAA
CAGTACGAGATTCTGTGTGTCAGCCAGTTTACCCTCCAGTGTGTCCTGAAGGGAAACAAGCCTGATTTCC
ACCTAGCAATGCCCACGGAGCAGGCAGAGGGCTTCTACAACAGCTTCCTGGAGCAGCTGCGTAAAACATA
CAGGCCGGAGCTTATCAAAGATGGCAAGTTTGGGGCCTACATGCAGGTGCACATTCAGAATGATGGGCCT
GTGACCATAGAGCTGGAATCGCCAGCTCCCGGCACTGCTACCTCTGACCCAAAGCAGACGGATTCTCGCT
CTGTCTCCCAGGCTGGAGTGCAGTGGCGCGATCTCCGTTCATTGCAAGCTCCACCTCCCGGGTTCATGCC
ATTCTTCGGCCTAAGCCTCCCAAGTAGCTGGGACTATAGGCACGTGCCACCATGCCCGGCTAATTTTTTT
GTATTTTTTTAG

Translation (213 aa):
MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDK
QYEILCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHIQNDGP
VTIELESPAPGTATSDPKQTDSRSVSQAGVQWRDLRSLQAPPPGFMPFFGLSLPSSWDYRHVPPCPANFF
VFF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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