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Report for CCDS10072.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10072.1 Public Homo sapiens 15 EXD1 24 110 108 CCDS HistoryNCBI Gene:161829Re-query CCDS DB by CCDS ID:10072.1Re-query CCDS DB by GeneID:161829See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10072.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314992.9 ENSP00000321029.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000314992.9Link to Ensembl Protein Viewer:ENSP00000321029.5Re-query CCDS DB by Nucleotide ID:ENST00000314992Re-query CCDS DB by Protein ID:ENSP00000321029
Original member Current member NCBI NM_152596.4 NP_689809.2 Accepted alive Link to Nucleotide Sequence:NM_152596.4Link to Protein Sequence:NP_689809.2Re-query CCDS DB by Nucleotide ID:NM_152596Re-query CCDS DB by Protein ID:NP_689809Link to BLAST:NP_689809.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689809.2 514 Q8NHP7-1 514 100% 0 0

Chromosomal Locations for CCDS 10072.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 41183931 41184593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41189937 41190128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41191442 41191585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41195775 41195855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41195933 41196037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41209501 41209587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41215775 41215833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41216668 41216795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41217097 41217154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41230479 41230506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1545 nt):
ATGGAGGACAGTGAATTCCTAGCTTATGTGGAACTACTAGATGAAGTGGAACAAGGCTCAGTGAGAGCAA
AAGCATCTTCTGTTAGTCTACATGCAGAAAGAACCTGGATGGAGAAAATGAAAGTTGAAGACCTAAATGT
ATGTGAGCCTGCTTCTCCTGCCCCTGAAGCACCAGCTACCTCTCTGCTGAATGACCTCAAGTACAGCCCA
TCAGAGGAAGAGGAGGTGACATACACAGTCATTAATCAATTCCAGCAGAAGTTTGGTGCTGCGATACTCC
ATATCAAGAAGCAGAATGTCCTGAGTGTGGCAGCAGAAGGAGCGAATGTATGTCGCCATGGCAAACTGTG
CTGGCTGCAGGTGGCCACAAATTGCCGAGTTTACTTATTTGACATTTTCCTTCTGGGAAGTCGAGCTTTC
CACAATGGACTTCAGATGATACTAGAAGACAAGAGAATTTTGAAGGTTATCCATGATTGTCGTTGGCTTT
CTGATTGCCTCTCTCATCAGTATGGAATTTTGCTGAATAATGTCTTTGACACACAGGTAGCAGATGTACT
TCAGTTTTCCATGGAAACGGGTGGCTATCTTCCAAACTGCATCACTACTTTGCAGGAGAGTTTAATCAAA
CACCTTCAAGTAGCCCCTAAATATCTCTCCTTTCTAGAAAAGAGACAAAAACTAATTCAGGAAAATCCAG
AAGTATGGTTCATCCGACCTGTTTCACCCTCTTTACTGAAAATTTTGGCCCTGGAAGCTACCTACCTGTT
ACCCCTTCGCTTGGCACTCCTAGATGAGATGATGTCTGACCTAACCACCCTGGTGGATGGTTACCTAAAC
ACGTATCGCGAAGGGTCTGCAGACCGGCTTGGAGGCACTGAGCCTACATGTATGGAGCTGCCAGAGGAAC
TGCTTCAACTCAAGGACTTCCAGAAGCAGCGCAGGGAGAAAGCTGCAAGAGAATATAGGGTGAATGCACA
GGGACTCCTGATAAGGACAGTGCTACAGCCAAAGAAATTAGTGACAGAGACAGCAGGGAAAGAGGAGAAA
GTCAAAGGCTTCTTATTTGGTAAAAATTTTAGGATAGATAAAGCTCCAAGTTTTACATCTCAAGACTTTC
ACGGGGATGTGAATTTACTGAAAGAAGAATCTTTGAATAAACAAGCTACAAATCCTCAACATCTACCTCC
CACAGAGGAAGGGGAAACCAGTGAGGATTCCAGTAACAAACTCATTTGCACAAAGTCAAAGGGGTCAGAG
GACCAGAGAATAACTCAGAAAGAACACTTTATGACACCCAAACATGAGTTTCAGGCAAGTTTATCTTTGA
AAGAGGAGACAGAACAGTTATTGATGGTGGAAAACAAGGAAGATTTAAAATGCACAAAACAGGCTGTTTC
AATGTCTTCCTTTCCTCAGGAAACCAGAGTGTCTCCAAGTGACACTTTTTATCCTATCAGAAAGACTGTG
GTTTCCACACTCCCTCCCTGTCCAGCCTTGGAGAAGATCGATTCCTGGATAAGTCCTTTTCTAAATCTGC
CCTAG

Translation (514 aa):
MEDSEFLAYVELLDEVEQGSVRAKASSVSLHAERTWMEKMKVEDLNVCEPASPAPEAPATSLLNDLKYSP
SEEEEVTYTVINQFQQKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVATNCRVYLFDIFLLGSRAF
HNGLQMILEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVADVLQFSMETGGYLPNCITTLQESLIK
HLQVAPKYLSFLEKRQKLIQENPEVWFIRPVSPSLLKILALEATYLLPLRLALLDEMMSDLTTLVDGYLN
TYREGSADRLGGTEPTCMELPEELLQLKDFQKQRREKAAREYRVNAQGLLIRTVLQPKKLVTETAGKEEK
VKGFLFGKNFRIDKAPSFTSQDFHGDVNLLKEESLNKQATNPQHLPPTEEGETSEDSSNKLICTKSKGSE
DQRITQKEHFMTPKHEFQASLSLKEETEQLLMVENKEDLKCTKQAVSMSSFPQETRVSPSDTFYPIRKTV
VSTLPPCPALEKIDSWISPFLNLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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