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Report for CCDS27141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27141.1 Public Mus musculus 14 Mcpt8 23 108 98 CCDS HistoryNCBI Gene:17231Re-query CCDS DB by CCDS ID:27141.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27141.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000015594.8 ENSMUSP00000015594.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000015594.8Link to Ensembl Protein Viewer:ENSMUSP00000015594.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000015594Re-query CCDS DB by Protein ID:ENSMUSP00000015594
Original member Current member NCBI NM_008572.1 NP_032598.1 Accepted alive Link to Nucleotide Sequence:NM_008572.1Link to Protein Sequence:NP_032598.1Re-query CCDS DB by Nucleotide ID:NM_008572Re-query CCDS DB by Protein ID:NP_032598Link to BLAST:NP_032598.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032598.1 247 P43430 247 100% 0 0

Chromosomal Locations for CCDS 27141.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 56082248 56082400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56082880 56083134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56083355 56083487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56083803 56083950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56085133 56085187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGTTCCTGCTCCTGGTCCTCCTGGTGGCTGCCCTGCCAGTCAACGCTGAAGGAGGGGAAATCATATGGG
GTACAGAGTCCAAACCCCACTCCCGGCCCTATATGGCATACATAAGGTTTAATGACAGCAAATCAGTCTA
TCGCTGTGGTGGTTTCCTGGTGGCAAGAGACATCGTAATGACAGCAGCTCACTGTAATGGAAAAGTTATA
AATGTAACCTTAGGAATTCACAATCTCAAGAAAAAGAAAAACACCCAGCTCATTCCTGTCAGTGAAGCCA
TACCTCACGAGAGCTTTGACAATGAAACACTGGTCAATGACATCATGCTCCTGAAGCTGGAACGCAAAGC
TCAACTCAACAGTGCTGTGGATACTATTGCCCTTCCAAAGAGCAAGGATTGGGTGAAACCTGGGCAGGTG
TGCACAGTGGCAGGTTGGGGAAAGTTGGCCAATTGCACTTTGTCTGACACACTTCAAGAAGTGAATCTAG
AAGTTCAAAAGGGCCAGAAGTGTCGCAGCATGTCCCAAACCTACAACGACTCCATCCAGCTCTGTGTGGG
AAATCCCAGTGAGAATAAGGCTACTGGTAAGGGTGACTCTGGCGGACCCTTTGTGTGTAATGGGGTGGTC
CAGGGCATTGTCAGTTGTCGCTTGTGTACTGGGACACTTCCTCGGGTATTCACCAGAATTTCCAGCTTTA
TGCCTTGGATTCGGAAAACAATGAAACTCCTGCAACAACCCTAG

Translation (247 aa):
MFLLLVLLVAALPVNAEGGEIIWGTESKPHSRPYMAYIRFNDSKSVYRCGGFLVARDIVMTAAHCNGKVI
NVTLGIHNLKKKKNTQLIPVSEAIPHESFDNETLVNDIMLLKLERKAQLNSAVDTIALPKSKDWVKPGQV
CTVAGWGKLANCTLSDTLQEVNLEVQKGQKCRSMSQTYNDSIQLCVGNPSENKATGKGDSGGPFVCNGVV
QGIVSCRLCTGTLPRVFTRISSFMPWIRKTMKLLQQP


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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