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Report for CCDS21596.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21596.1 Public Mus musculus 7 Or51b6 23 108 98 CCDS HistoryNCBI Gene:18365Re-query CCDS DB by CCDS ID:21596.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21596.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000209528.2 ENSMUSP00000147914.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000209528.2Link to Ensembl Protein Viewer:ENSMUSP00000147914.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000209528Re-query CCDS DB by Protein ID:ENSMUSP00000147914
Original member Current member NCBI NM_013616.4 NP_038644.2 Accepted alive Link to Nucleotide Sequence:NM_013616.4Link to Protein Sequence:NP_038644.2Re-query CCDS DB by Nucleotide ID:NM_013616Re-query CCDS DB by Protein ID:NP_038644Link to BLAST:NP_038644.2

Chromosomal Locations for CCDS 21596.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 103906441 103907388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGCCTTCAATGTGGCTCAACATTTCCTCTTCCCCATTCCTGCTCACAGGCTTCCCAGGTCTGGAGAAAG
CCCATCACCTGATCTCCCTCCCATTACTGATGGCCTATATCTCCATATTACTTGGCAACGGCACCCTCCT
TTTCCTCATTAAGGATGACCATAACCTCCATGAGCCCATGTATTATTTCTTAGGTATGTTGGCAGCTACG
GATCTTGGCGTAACATTGACCACCATGCCCACAGTGCTGAGTGTACTATGGTTAAATCACAGGGAAATTG
GCCATGGAGCCTGCTTCTCTCAGGCCTATTTTATCCACACTCTCTCTATTGTGGAGTCGGGGGTCTTGCT
TGCCATGGCCTATGACCGTTTCATTGCCATTCGCAACCCACTAAGGTATACCACCATCCTTACAGATACT
AAGGTAATAAAGATTGGCATAGGCGTAGTGATGAGGGCTGGTCTGTCAATCATGCCAATAATCATTCGCC
TGCATTGGTTTCCCTATTGTCGCTCCCATGTACTCTCCCATGCTTTCTGTCTACACCAAGATGTCATCAA
GCTAGCCTGCGCTGACATCACATTCAATCGTCTCTATCCTGTTGTGGTTGTATTTGCAATGGTCTTGCTA
GATTTCCTGATCATCTTCTTCTCCTACGTTTTGATTCTCAAGACTGTCATGGGCATTGCTTCTACAGATG
AGCGGGCCAAGGCTCTCAACACATGTGTCTCCCACATCTGTTGCATCTTGGTCTTCTATGTCACTGTGGT
TGGTCTGACGTTTATTCACAGGTTTGGAAAGAATGTTCCTCATGTCGTCCACATCACAATGAGCTACGTC
TACTTTCTTTTCCCCCCTTTTATGAACCCTGTCATCTATAGCATTAAGACCAAACAGATTCAGAGTGGTT
TGCTTCGCTTATTCTCCCTGCCTTGTTCTAAAACATGA

Translation (315 aa):
MPSMWLNISSSPFLLTGFPGLEKAHHLISLPLLMAYISILLGNGTLLFLIKDDHNLHEPMYYFLGMLAAT
DLGVTLTTMPTVLSVLWLNHREIGHGACFSQAYFIHTLSIVESGVLLAMAYDRFIAIRNPLRYTTILTDT
KVIKIGIGVVMRAGLSIMPIIIRLHWFPYCRSHVLSHAFCLHQDVIKLACADITFNRLYPVVVVFAMVLL
DFLIIFFSYVLILKTVMGIASTDERAKALNTCVSHICCILVFYVTVVGLTFIHRFGKNVPHVVHITMSYV
YFLFPPFMNPVIYSIKTKQIQSGLLRLFSLPCSKT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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