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Report for CCDS21594.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21594.1 Public Mus musculus 7 Or51b4 23 108 98 CCDS HistoryNCBI Gene:18367Re-query CCDS DB by CCDS ID:21594.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21594.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000079117.1 ENSMUSP00000078119.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000079117.1Link to Ensembl Protein Viewer:ENSMUSP00000078119.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000079117Re-query CCDS DB by Protein ID:ENSMUSP00000078119
Original member Current member EBI ENSMUST00000216303.1 ENSMUSP00000149058.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216303.1Link to Ensembl Protein Viewer:ENSMUSP00000149058.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216303Re-query CCDS DB by Protein ID:ENSMUSP00000149058
Original member Current member NCBI NM_013618.3 NP_038646.2 Accepted alive Link to Nucleotide Sequence:NM_013618.3Link to Protein Sequence:NP_038646.2Re-query CCDS DB by Nucleotide ID:NM_013618Re-query CCDS DB by Protein ID:NP_038646Link to BLAST:NP_038646.2

Chromosomal Locations for CCDS 21594.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 103881306 103882241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGTGGCCCAACAGCAGTGATGCTCCTTTCCTACTGACGGGCTTTCTGGGCTTGGAAATGATTCACCACT
GGATCTCTATCCCTTTCTTTGTCATCTACTTCTCCATCATTTTAGGGAATGGTACCCTTCTCTTCATCAT
TTGGAGTGACCACAGTCTTCATGAGCCCATGTACTACTTCTTGGCTGTGCTGGCAAGTATGGACCTTGGG
ATGACACTAACCACGATGCCCACAGTGCTGGGTGTCCTGGTGCTAAACCAGAGGGAGATTGCACAAGGGG
CCTGTTTCATTCAGTCCTACTTCATTCACTCACTAGCCATTGTAGAATCGGGGGTCTTGCTTGCCATGTC
TTATGATCGATTTGTTGCCATCTGCACACCACTGCATTACAACTCTATCCTTACCAATTCCAGGGTGATG
AAGATGGCACTGGGAGCACTGCTCAGAGGATTTGTGTCCATCGTGCCCCCAATCATGCCTCTCTTTTGGT
TCCCATACTGCCATTCCCATGTTCTTTCTCATGCCTTCTGCCTCCACCAAGATGTCATGAAACTGGCATG
TGCTGACATTACTTTTAACCTCATATATCCAGTTGTTTTGGTTGCTTTGACTTTCTTCCTCGATGCGCTC
ATCATTATCTTTTCCTATGTCCTCATTCTGAAGACAGTTATGGGCATTGCCTCTGGAGAGGAGAGAAAAA
AGTCTCTCAACACCTGTGTTTCACACATTAGCTGTGTCCTGGTCTTTTACATCACTGTGATTGGCCTGAC
CTTCATTCACAGGTTTGGAAAGCATGCACCCCATGTGGTGCACATTACCATGAGCTATGTCTACTTTCTC
TTTCCTCCATTTATGAACCCCATCATTTACAGCATCAAGACCAAGCAAATTCAGAGGAGTGTTCTCCGTC
TACTGTCCAAACACAGTAGGACTTGA

Translation (311 aa):
MWPNSSDAPFLLTGFLGLEMIHHWISIPFFVIYFSIILGNGTLLFIIWSDHSLHEPMYYFLAVLASMDLG
MTLTTMPTVLGVLVLNQREIAQGACFIQSYFIHSLAIVESGVLLAMSYDRFVAICTPLHYNSILTNSRVM
KMALGALLRGFVSIVPPIMPLFWFPYCHSHVLSHAFCLHQDVMKLACADITFNLIYPVVLVALTFFLDAL
IIIFSYVLILKTVMGIASGEERKKSLNTCVSHISCVLVFYITVIGLTFIHRFGKHAPHVVHITMSYVYFL
FPPFMNPIIYSIKTKQIQRSVLRLLSKHSRT


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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