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Report for CCDS94307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94307.1 Public Homo sapiens 8 CSPP1 24 110 108 CCDS HistoryNCBI Gene:79848Re-query CCDS DB by CCDS ID:94307.1Re-query CCDS DB by GeneID:79848See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 94307.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000678616.1 ENSP00000504733.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000678616.1Link to Ensembl Protein Viewer:ENSP00000504733.1Re-query CCDS DB by Nucleotide ID:ENST00000678616Re-query CCDS DB by Protein ID:ENSP00000504733
Original member Current member NCBI NM_001382391.1 NP_001369320.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001382391.1Link to Protein Sequence:NP_001369320.1Re-query CCDS DB by Nucleotide ID:NM_001382391Re-query CCDS DB by Protein ID:NP_001369320Link to BLAST:NP_001369320.1

Chromosomal Locations for CCDS 94307.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 67074253 67074351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67076482 67076581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67086007 67086110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67091803 67091883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67093543 67093641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67095293 67095732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67103037 67103135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67105905 67105975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67111972 67112065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67113805 67113862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67114329 67114370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67115914 67116122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67118248 67118369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67118743 67118821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67131951 67132080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67137456 67137603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67149783 67149935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67154024 67154136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67158447 67158596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67158991 67159137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67161811 67161915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67163732 67163798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67164391 67164508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67172416 67172555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67175296 67175436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67177680 67177726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67179863 67179926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67190650 67190759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67193464 67193602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67195382 67195593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3681 nt):
ATGGCTGATAATTTGGATGAATTTATTGAAGAGCAAAAAGCCAGATTGGCCGAAGACAAAGCAGAGTTGG
AA
AGTGATCCACCTTACATGGAAATGAAGGGAAAGTTGTCAGCGAAGCTTTCTGAAAACAGTAAGATACT
G
ATCTCTATGGCTAAGGAAAACATACCACCAAATAGTCAACAGACCAGGGGTTCCTTAGGAATTGATTAT
GGA
TTAAGTTTACCACTTGGAGAAGACTATGAACGGAAGAAACATAAATTAAAAGAAGAATTGCGGCAAG
AT
TACAGACGTTATCTTACTCAGAAAAATTTTCTATCTACGAGTGAAACAGATCCATCTACTTTGGGAGT
T
TCTCTTCCTATTGGTGAGAGGTTATCTGCTAAGGAAAGGTTGAAACTTGAACGTAACAAAGAATACAAT
CAG
TTTCTCAGGGGTAAGGAAGAATCCAGTGAAAAGTTCAGGCAGGTGGAAAAGAGTACTGAGCCCAAGA
GT
CAGAGAAATAAAAAACCTATTGGTCAAGTTAAGCCTGATCTAACTTCACAAATACAGACATCTTGTGA
A
AATTCAGAGGGTCCTAGAAAAGATGTCTTAACTCCTTCAGAGGCATATGAAGAACTTCTGAACCAAAGA
CGA
CTAGAGGAGGACAGATACCGACAACTAGATGATGAAATCGAATTAAGGAATAGAAGAATTATTAAAA
AA
GCAAATGAAGAAGTGGGCATTTCCAACCTAAAACATCAAAGGTTTGCAAGCAAGGCTGGCATTCCAGA
T
AGAAGATTTCACAGATTTAATGAGGATCGTGTTTTTGATAGACGGTATCATAGACCAGACCAAGATCCT
GAA
GTAAGTGAAGAAATGGATGAGAGGTTTAGATATGAAAGTGATTTTGATAGAAGACTTTCGAGAGTGT
AT
ACAAATGACAGGATGCACAGGAACAAACGAGGGAATATGCCTCCTATGGAACATGATGGGGATGTTAT
A
GAACAGTCAAACATAAGAATTTCATCTGCTGAAAATAAAAGTGCTCCAGACAATGAAACATCCAAATCT
GCT
AATCAAGATACCTGTAGTCCTTTTGCAGGGATGCTCTTTGGAGGTGAAGATCGAGAACTTATTCAGA
GA
AGGAAAGAGAAATACAGACTAGAACTGTTGGAACAAATGGCTGAGCAACAGAGGAACAAGAGACGAGA
A
AAAGATTTAGAACTCAGGGTTGCAGCGTCTGGAGCACAAGACCCTGAGAAATCGTGGAATGAATTACTC
ACA
TCATTGCAGTTAAGTAAGGAGGAGCCTGATAGACTAAAGCAGTTTAGTGTGGCACCAAGACACTTTG
AA
GAGATGATACCACCTGAAAGACCCAGAATAGCTTTCCAGACACCTCTCCCTCCTTTATCTGCCCCATC
T
GTCCCACCCATCCCATCAGTTCATCCTGTTCCTTCTCAAAATGAAGATTTGCGCAGTGGACTCAGCAGC
GCC
CTTGGTGAAATGGTGTCTCCCAGGATTGCACCTCTGCCTCCACCTCCCCTACTACCACCTTTGGCTA
CT
AACTATCGAACTCCTTATGATGATGCATACTATTTTTATGGGTCCAGGAATACTTTCGATCCCAGTCT
T
GCTTATTATGGTTCAGGAATGATGGGCGTACAGCCTGCAGCTTATGTTAGTGCTCCTGTCACCCACCAA
CTA
GCACAACCTGTTGTGAATACGGTTGGACAGAATGAACTGAAGATTACAAGTGATCAAGTGATAAATT
CA
GGATTGATTTTTGAAGATAAACCGAAACCTTCCAAACAGTCACTTCAGTCTTACCAAGAGGCTTTGCA
G
CAGCAGATTCGGGAAAGAGAAGAAAGAAGGAAGAAAGAACGTGAAGAAAAAGAAGAATATGAAGCTAAA
TTA
GAAGCTGAAATGAGAACATATAATCCCTGGGGAAAAGGTGGAGGTGGTGCTCCTCTCAGGGATGCAA
AA
GGAAATCTGATAACTGATTTGAATAGGATGCACAGACAAAATATAGATGCCTACCATAACCCAGATGC
A
AGAACATATGAAGATAAAAGGGCTGTTGTATCTCTAGACCCAAATTTAGCCACTTCAAATGCTGAGAAC
CTA
GAAGATGCTGCAAATAAAAGCTCAGGTCATATGCAAACACAGAGCTCTCCTTTTGCTCGGGGAAATG
TA
TTTGGTGAGCCTCCAACTGAACTTCAGATTAAACAGCAAGAATTATACAAGAATTTTCTTCGTTTCCA
G
ATTGAGGAAAAGAAACAAAGAGAGGAAGCAGAGCGAGAGAGACTGAGAATTGCAGAAGAAAAAGAAGAA
AGA
CGGCTTGCAGAACAGAGGGCACGAATTCAGCAGGAGTATGAAGAGGAACAGGAAAAGAAAAGAGAGA
AA
GAGGAGGAGCAAAGGCTAAAAAATGAAGAGCATATTCGGTTAGCTGAAGAAAGACAAAAAGAAGCAGA
A
AGAAAGAAGAAAGAAGAAGAAGAAAAATATAACCTGCAACTTCAGCACTACTGTGAAAGAGACAATTTG
ATT
GGGGAAGAAACAAAGCACATGAGACAGCCTTCTCCTATAGTTCCTGCTCTTCAGAACAAAATTGCAA
GC
AAACTCCAAAGACCTCCTTCAGTTGACAGCATCATACGTTCCTTTATTCATGAAAGTTCCATGTCCAG
G
GCACAGTCACCCCCGGTACCTGCCAGGAAAAATCAGCTCCGTGCAGAAGAGGAGAAAAAAAATGTAATT
ATG
GAATTATCAGAAATGAGAAAACAGCTTCGTAGTGAAGAGAGGCGTCTACAAGAGCGATTGCTACACA
TG
GACAGTGATGATGAAATTCCTATCAGGAAAAAGGAAAGGAATCCCATGGATATATTTGATATGGCTAG
A
CATCGGTTGCAAGCTCCTGTCAGAAGACAGTCCCCTAAGGGCTTAGACGCTGCCACTTTTCAGAATGTT
CAT
GATTTTAATGAGCTGAAAGATAGAGATTCAGAAACACGAGTTGATCTGAAATTTATGTACCTGGATC
CT
CCAAGAGATCATCACACCTTAGAGATTCAGCAGCAAGCCCTGCTAAGAGAGCAGCAGAAGAGGCTGAA
C
AGAATAAAAATGCAGGAAGGTGCCAAAGTTGACTTAGATGCCATCCCAAGTGCTAAAGTACGAGAGCAA
AGA
ATGCCCAGAGATGACACTAGTGATTTCTTGAAAAACTCATTATTGGAATCTGATAGTGCTTTTATTG
GG
GCTTACGGTGAGACATATCCTGCCATTGAAGATGACGTCCTCCCTCCACCATCACAGTTGCCCTCTGC
A
CGGGAGCGCAGGAGGAACAAATGGAAAGGACTAGACATTGATAGCAGTCGTCCTAATGTAGCACCAGAT
GGT
CTCTCTCTAAAATCTATATCCAGTGTAAATGTTGATGAGCTTAGAGTGAGAAATGAGGAACGAATGC
GA
AGACTGAATGAATTTCACAATAAACCTATTAATACAGATGATGAGAGTTCACTGGTTGACCCTGATGA
C
ATCATGAAACACATAGGGGATGACGGATCAAACTCTGTAGCAACTGAGCCCTGGCTCCGCCCTGGCACT
TCA
GAAACGCTGAAACGTTTCATGGCAGAGCAGCTGAACCAGGAGCAGCAGCAGATTCCTGGAAAACCAG
GC
ACTTTCACTTGGCAGGGCCTGTCGACTGCACATGGTTAA


Translation (1226 aa):
MADNLDEFIEEQKARLAEDKAELESDPPYMEMKGKLSAKLSENSKILISMAKENIPPNSQQTRGSLGIDY
G
LSLPLGEDYERKKHKLKEELRQDYRRYLTQ
KNFLSTSETDPSTLGVSLPIGERLSAKERLKLERNKEYN
Q
FLRGKEESSEKFRQVEKSTE
PKSQRNKKPIGQVKPDLTSQIQTSCENSEGPRKDVLTPSEAYEELLNQR
R
LEEDRYRQLDDEIELRNRRIIKKANEEVGISNLKHQRFASKAGIPDRRFHRFNEDRVFDRRYHRPDQDP
E
VSEEMDERFRYESDFDRRLSRVYTND
RMHRNKRGNMPPMEHDGDVIEQSNIRISSAENKSAPDNETSKS
A
NQDTCSPFAGMLF
GGEDRELIQRRKEKYRLELLEQMAEQQRNKRREKDLELRVAASGAQDPEKSWNELL
T
SLQLSKEE
PDRLKQFSVAPRHFEEMIPPERPRIAFQTPLPPLSAPSVPPIPSVHPVPSQNEDLRSGLSS
A
LGEMVSP
RIAPLPPPPLLPPLATNYRTPYDDAYYFYGSRNTFDPSLAYYGSGMMGVQPAAYVSAPVTHQ
L
AQPV
VNTVGQNELKITSDQVINSGLIFEDKPKPSKQSLQSYQEALQQQIREREERRKKEREEKEEYEAK
L
EAEMRTYNPWGKGGGGAPLRDAKGNLI
TDLNRMHRQNIDAYHNPDARTYEDKRAVVSLDPNLATSNAEN
L
EDAANKSS
GHMQTQSSPFARGNVFGEPPTELQIKQQELYKNFLRFQIEEKKQREEAERERLRIAEEKEE
R
RLAEQRARIQQEYEEEQEKKREKEEE
QRLKNEEHIRLAEERQKEAERKKKEEEEKYNLQLQHYCERDNL
I
GEETK
HMRQPSPIVPALQNKIASKLQRPPSVDSIIRSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVI
M
ELSEMRKQLRSEERRLQERLLHMDSDDEIPI
RKKERNPMDIFDMARHRLQAPVRRQSPKGLDAATFQNV
H
DFNELKDR
DSETRVDLKFMYLDPPRDHHTLEIQQQALLREQQKRLNRIKMQEGAKVDLDAIPSAKVREQ
R
M
PRDDTSDFLKNSLLESDSAFIGAYGETYPAIEDDVLPPPSQLPSARERRRNKWKGLDIDSSRPNVAPD
G
LSLKSISSVNVDELRVRNEERMRRLNEFHNKPINT
DDESSLVDPDDIMKHIGDDGSNSVATEPWLRPGT
S
ETLKRFMAEQLNQEQQQIPGKPGTFTWQGLSTAHG




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser