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Report for CCDS81064.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81064.1 Public Mus musculus 9 Cdv3 23 108 98 CCDS HistoryNCBI Gene:321022Re-query CCDS DB by CCDS ID:81064.1Re-query CCDS DB by GeneID:321022See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81064.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000189896.1 ENSMUSP00000139440.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000189896.1Link to Ensembl Protein Viewer:ENSMUSP00000139440.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000189896Re-query CCDS DB by Protein ID:ENSMUSP00000139440
Original member Current member NCBI NM_001134426.1 NP_001127898.1 Accepted alive Link to Nucleotide Sequence:NM_001134426.1Link to Protein Sequence:NP_001127898.1Re-query CCDS DB by Nucleotide ID:NM_001134426Re-query CCDS DB by Protein ID:NP_001127898Link to BLAST:NP_001127898.1

Chromosomal Locations for CCDS 81064.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 103356014 103356026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 103356280 103356439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 103359876 103360018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 103363975 103364051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 103365054 103365368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (708 nt):
ATGGCCGAGACCGAGGAGCGGAGCCTGGACAACTTCTTCGCCAAGAGGGACAAGAAGAAGAAGAAGGAAC
GGAGCAGTCGCGCGGCCAACGCGGCGAGCGGCGCGGGCGGGAGCAGCGCGGCGGCGGGCTCCAGGCCGGG
CGATGGCGGGAGCCTGGGCTCCGGTGCCAGGTCGGGCGACGGCGGGAGCTTGGGCTCCGGCTCCAGGTCG
GGCGACGGCGGGAGCTCGGGCTCTGGTGCTAGGTCCGGAGACGGCGGGAGCTCGAGGTCCGGAGACGGCG
GGAGCGCGGGCCCCGCCGGCAAGGCCATAACGAAGGATGAAAATGAGTGGAAAGAATTTGAGCAAAGAGA
GGTTGATTACAGCGGATTAAGAGTTCAGGCAATGCAAATAAGTGAAAAGGAAGATGATGATAATGAGAAG
AGAGAAGATCCAGGAGATAATTGGGAAGAAGGTGGAGGTGGCAGTGGAGCAGAAAAATCTTCAGGTCCCT
GGAATAAAACCGCTCCGGTACAAGCGCCTCCTGCTCCAGTAACAGTTACAGAAACCCCGGAGCCAGCAAT
GCCCAGTGGTGTATACAGGCCTCCTGGGGCAAGGCTAACCACAACAAGGAAAACGCCACAAGGACCACCA
GAAATATACAGTGACACGCAGTTCCCATCCCTGCAGTCCACTGCCAAGCATGTAGAGAGCCGGAAGTACT
TAAAATGA

Translation (235 aa):
MAETEERSLDNFFAKRDKKKKKERSSRAANAASGAGGSSAAAGSRPGDGGSLGSGARSGDGGSLGSGSRS
GDGGSSGSGARSGDGGSSRSGDGGSAGPAGKAITKDENEWKEFEQREVDYSGLRVQAMQISEKEDDDNEK
REDPGDNWEEGGGGSGAEKSSGPWNKTAPVQAPPAPVTVTETPEPAMPSGVYRPPGARLTTTRKTPQGPP
EIYSDTQFPSLQSTAKHVESRKYLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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