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Report for CCDS94129.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94129.1 Public Homo sapiens 7 SPDYE16 24 110 108 CCDS HistoryNCBI Gene:102723555Re-query CCDS DB by CCDS ID:94129.1Re-query CCDS DB by GeneID:102723555See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 94129.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000633306.2 ENSP00000487772.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000633306.2Link to Ensembl Protein Viewer:ENSP00000487772.2Re-query CCDS DB by Nucleotide ID:ENST00000633306Re-query CCDS DB by Protein ID:ENSP00000487772
Original member Current member EBI ENST00000632547.2 ENSP00000488034.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000632547.2Link to Ensembl Protein Viewer:ENSP00000488034.1Re-query CCDS DB by Nucleotide ID:ENST00000632547Re-query CCDS DB by Protein ID:ENSP00000488034
Original member Current member NCBI NM_001394943.1 NP_001381872.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001394943.1Link to Protein Sequence:NP_001381872.1Re-query CCDS DB by Nucleotide ID:NM_001394943Re-query CCDS DB by Protein ID:NP_001381872Link to BLAST:NP_001381872.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381872.1 352 A6NNV3 352 100% 0 0

Chromosomal Locations for CCDS 94129.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 76533694 76533753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76533876 76534119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76536172 76536257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76537493 76537551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76538586 76538816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76540128 76540346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76541300 76541459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGGACAGAACGGAGACTAGGTTCCGTAAGAGGGGACAGATTAAGGGAAAGATCACGACCAGCCGTCAAC
CTCACCCCCAGAATGAGCAGAGTCCCCAGCGGAGCACCTCGGGGTACTCCCTCCAGGAGGTGGTGGATGA
TGAAGTGTTGGGATCATCAGCCCCTGGGGTAGATCCCAGCCCCCCATGTAGGTCCCTTGGCTGGAAAAGG
AAGAAGGAGTGGTCAGATGAATCTGAGGAGGAGCCGGAGAAGGAGCTCGCCCCTGAGCCTGAGGAGACCT
GGGTAGTGGAGATGCTGTGTGGGCTCAAGATGAAGCTGAAGCAACAGCGAGTGTCACCCATCCTCCCTGA
GCACCACAAGGACTTCAACAGTCAGCTTGCCCCTGGGGTAGATCCCAGCCCCCCGCATAGGTCCTTTTGC
TGGAAAAGGAAGAGGGAGTGGTGGGACGAATCTGAGGAGTCGTTGGAGGAGGAGCCACGGAAGGTGCTCG
CCCCTGAGCCTGAGGAGATCTGGGTGGTGGAGATGCTGTGTGGCCTCAAGATGAAGCTGAAGCGACGGCG
AGTGTCGCTCGTGCTCCCTGAGCACCACGAGGCCTTCAACAGGCTGCTTGAGGATCCTGTCATTAAAAGA
TTCCTGGCCTGGGACAAAGATCTGAGGGTGTCGGACAAGTATCTCCTGGCTATGGTCATAGCGTATTTCA
GCCGGGCCGGCCTCCCCTCCTGGCAATACCAACGCATTCATTTCTTCCTGGCTCTCTACCTGGCCAATGA
CATGGAGGAGGACGACGAGGACCCCAAACAAAACATCTTCTACTTCCTGTATGGGAAGACCCGCTCTCGC
ATACCCTTGGTCCGTAACCGTCGGTTCCAGTTATGCCGTTGCATGAACCCGAGGGCCAGGAAGAACCGCT
CTCAGATAGCCCTGTTCCAGAAACTTCGGTTCCAGTTCTTCTGTTCCATGAGCGGCAGGGCTTGGGTTTC
CCGGGAGGAGTTGGAGGAGATCCAGGCTTATGACCCAGAGCACTGGGTGTGGGCGCGAGATCGCGCTCGC
CTTTCCTAG

Translation (352 aa):
MDRTETRFRKRGQIKGKITTSRQPHPQNEQSPQRSTSGYSLQEVVDDEVLGSSAPGVDPSPPCRSLGWKR
KKEWSDESEEEPEKELAPEPEETWVVEMLCGLKMKLKQQRVSPILPEHHKDFNSQLAPGVDPSPPHRSFC
WKRKREWWDESEESLEEEPRKVLAPEPEEIWVVEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLEDPVIKR
FLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEDPKQNIFYFLYGKTRSR
IPLVRNRRFQLCRCMNPRARKNRSQIALFQKLRFQFFCSMSGRAWVSREELEEIQAYDPEHWVWARDRAR
LS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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